RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CACNG1Q06432 222 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 KLC1Q07866 573 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 ITIH4Q14624 930 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 CDSNQ15517 529 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.65□□□□□ -0.542e-12■■■□□ 18.5
UBR4-211ENST00000467272 TCTE1Q5JU00 501 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 RPTNQ6XPR3 784 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 SHISA6Q6ZSJ9 500 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 MRGPRGQ86SM5 289 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 HOOK3Q86VS8 718 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 TREX2Q9BQ50 279 aaPredicted RBP11.65□□□□□ -0.54
UBR4-211ENST00000467272 TBL1YQ9BQ87 522 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 GOLPH3Q9H4A6 298 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 ZNF160Q9HCG1 818 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 EFR3BQ9Y2G0 817 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 MRPS2Q9Y399 296 aaKnown RBP11.65□□□□□ -0.54
UBR4-211ENST00000467272 ANKHD1Q8IWZ3 2542 aaKnown RBP11.65□□□□□ -0.54
UBR4-211ENST00000467272 MYO7BQ6PIF6 2116 aa11.65□□□□□ -0.55
UBR4-211ENST00000467272 TRAV17A0A0B4J275 112 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 ISM1B1AKI9 464 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 TARM1B6A8C7 271 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 USP1O94782 785 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 S1PR4O95977 384 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 SERPINA7P05543 415 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 ZGLP1P0C6A0 271 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 CD9P21926 228 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 FDXRP22570 491 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 FOXN2P32314 431 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 CARSP49589 748 aaKnown RBP11.64□□□□□ -0.55
UBR4-211ENST00000467272 KRTAP10-9P60411 292 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 GRM7Q14831 915 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 RBBP7Q16576 425 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 DNAJC21Q5F1R6 531 aaKnown RBP11.64□□□□□ -0.55
UBR4-211ENST00000467272 ZNF449Q6P9G9 518 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 NAPRTQ6XQN6 538 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 VRK3Q8IV63 474 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 KBTBD2Q8IY47 623 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 ARHGEF39Q8N4T4 335 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 LMNTD1Q8N9Z9 388 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 OR2L8Q8NGY9 312 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 DNAJB8Q8NHS0 232 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 ACTL9Q8TC94 416 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 STT3BQ8TCJ2 826 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 ADAMTS18Q8TE60 1221 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 KRT35Q92764 455 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 ZUFSPQ96AP4 578 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 SPATA13Q96N96 652 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 NHEJ1Q9H9Q4 299 aaPredicted RBP11.64□□□□□ -0.55
UBR4-211ENST00000467272 PLA2G3Q9NZ20 509 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 IFNKQ9P0W0 207 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 ZNF835Q9Y2P0 537 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 TDRKHQ9Y2W6 561 aaKnown RBP11.64□□□□□ -0.55
UBR4-211ENST00000467272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.64□□□□□ -0.551e-8■■□□□ 12.7
UBR4-211ENST00000467272 NAV3Q8IVL0 2385 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 PCNX1Q96RV3 2341 aa11.64□□□□□ -0.55
UBR4-211ENST00000467272 NCOA6Q14686 2063 aaPredicted RBP11.63□□□□□ -0.55
UBR4-211ENST00000467272 LOC102723996A0A087X1L8 192 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 C19orf84I3L1E1 186 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 QSOX1O00391 747 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 SPOPO43791 374 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 AKR1B10O60218 316 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 SRPX2O60687 465 aaPredicted RBP11.63□□□□□ -0.55
UBR4-211ENST00000467272 FKBP9O95302 570 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 FTH1P02794 183 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 TNNT1P13805 278 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 ACPPP15309 386 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 CCR7P32248 378 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 PTPN7P35236 360 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 GRIA3P42263 894 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 EFNA3P52797 238 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 SPARCL1Q14515 664 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 ZC3H12BQ5HYM0 836 aaKnown RBP11.63□□□□□ -0.55
UBR4-211ENST00000467272 IRAK1BP1Q5VVH5 260 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 FRMPD2BQ6IN97 320 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 MTFR2Q6P444 385 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 FIGLAQ6QHK4 219 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 GFRALQ6UXV0 394 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 NDUFAF7Q7L592 441 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 NLRP9Q7RTR0 991 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 TAS2R42Q7RTR8 314 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 LAPTM4BQ86VI4 370 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 TMTC1Q8IUR5 882 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 HMGCLL1Q8TB92 370 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 BRIX1Q8TDN6 353 aaKnown RBP11.63□□□□□ -0.55
UBR4-211ENST00000467272 ELMO1Q92556 727 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 SLC22A18Q96BI1 424 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 C8orf44Q96CB5 159 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 C10orf90Q96M02 699 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 CRB3Q9BUF7 120 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 HEMGNQ9BXL5 484 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 SYNPO2LQ9H987 977 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 SMARCAL1Q9NZC9 954 aa11.63□□□□□ -0.55
UBR4-211ENST00000467272 FBN3Q75N90 2809 aa11.62□□□□□ -0.55
UBR4-211ENST00000467272 MED13LQ71F56 2210 aa11.62□□□□□ -0.55
UBR4-211ENST00000467272 LOC105369274A0A096LPK9 316 aa11.62□□□□□ -0.55
UBR4-211ENST00000467272 IGHV1-45A0A0A0MS14 117 aa11.62□□□□□ -0.55
UBR4-211ENST00000467272 LOC102723532A0A0G2JNH3 316 aa11.62□□□□□ -0.55
UBR4-211ENST00000467272 HYKKA2RU49 373 aa11.62□□□□□ -0.55
UBR4-211ENST00000467272 CCL21O00585 134 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms