RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 EPHA2P29317 976 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 TIA1P31483 386 aaKnown RBP eCLIP4.04□□□□□ -1.765e-6■■■■□ 20.5
CDC42BPA-211ENST00000466538 WNT5AP41221 380 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 PRKCIP41743 596 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 GMPSP49915 693 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 MAZP56270 477 aaKnown RBP4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 DMPKQ09013 629 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ILF2Q12905 390 aaKnown RBP4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 TAF13Q15543 124 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ANKRD20A4Q4UJ75 823 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ZNF585BQ52M93 769 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ANKRD20A8PQ5CZ79 823 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ANKRD20A2Q5SQ80 823 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ANKRD20A1Q5TYW2 823 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ANKRD20A3Q5VUR7 823 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 SLC27A1Q6PCB7 646 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 NRARPQ7Z6K4 114 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 FAM219AQ8IW50 185 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 KLHL7Q8IXQ5 586 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 NHLRC2Q8NBF2 726 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 OR4K1Q8NGD4 311 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 SPATA20Q8TB22 786 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 AFAP1L1Q8TED9 768 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 PHLDA1Q8WV24 401 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 HEXDCQ8WVB3 486 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 PROX1Q92786 737 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 SLC47A1Q96FL8 570 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 PKP4Q99569 1192 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 PRRG4Q9BZD6 226 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 Q9H8V8 135 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 UPF2Q9HAU5 1272 aaKnown RBP4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 FGF21Q9NSA1 209 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ACAD8Q9UKU7 415 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ITGA11Q9UKX5 1188 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 WDR83OSQ9Y284 106 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 EME2A4GXA9 379 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 DUXAA6NLW8 204 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 FAM86B1E9PN63 330 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 H0YAE9 185 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 SNX3O60493 162 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 CAVIN2O95810 425 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 FAM86B2P0C5J1 330 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 IGHV4-38-2P0DP08 117 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 LIFP15018 202 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 NR1D1P20393 614 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 JAK1P23458 1154 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 CDX1P47902 265 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 CDH11P55287 796 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 MTCP1P56278 107 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 MORF4L2Q15014 288 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 PTGISQ16647 500 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 PHKG1Q16816 387 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 LACTB2Q53H82 288 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 IYDQ6PHW0 289 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 GDPD4Q6W3E5 623 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 PIWIL3Q7Z3Z3 882 aaKnown RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 FOXP4Q8IVH2 680 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 UNC45BQ8IWX7 931 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 ANKRD13CQ8N6S4 541 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 NOA1Q8NC60 698 aaKnown RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 SLC24A4Q8NFF2 622 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 FAM71F1Q96KD3 344 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 GPATCH1Q9BRR8 931 aaKnown RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 S1PR5Q9H228 398 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 TFB2MQ9H5Q4 396 aaKnown RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 LMAN1LQ9HAT1 526 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 A4GALTQ9NPC4 353 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 SDR39U1Q9NRG7 319 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 CACNG4Q9UBN1 327 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 ARMCX3Q9UH62 379 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 DAPK2Q9UIK4 370 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 FAF1Q9UNN5 650 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 KCNK7Q9Y2U2 307 aa4.03□□□□□ -1.76
CDC42BPA-211ENST00000466538 A0A0U1RQK1 487 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 LOC101059948A0A1B0GTJ6 334 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF320A2RRD8 509 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 SDR42E2A6NKP2 422 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 C2orf81A6NN90 581 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 YDJCA8MPS7 323 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 O00370 1275 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ARPC2O15144 300 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 BUB3O43684 328 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 FCGR3BO75015 233 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 NR3C1P04150 777 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 RLN1P04808 185 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 SUPT20HL2P0C7V6 817 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 GP1BBP13224 206 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 EPORP19235 508 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 CA4P22748 312 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 VAMP7P51809 220 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 GAS1P54826 345 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 PTENP60484 403 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF415Q09FC8 603 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLMAPQ14BN4 828 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 RRS1Q15050 365 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZRSR1Q15695 479 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF672Q499Z4 452 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 PHLDA2Q53GA4 152 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 PDLIM3Q53GG5 364 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 TECRLQ5HYJ1 363 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms