RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 TRAPPC6AO75865 159 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 HEXBP07686 556 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 IMPDH1P20839 514 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 TMEM115Q12893 351 aaPredicted RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 ZNF783Q6ZMS7 281 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 OR10A6Q8NH74 314 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 RBM4BQ9BQ04 359 aaKnown RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 RBM4Q9BWF3 364 aaKnown RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 CLK4Q9HAZ1 481 aaKnown RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 RC3H2Q9HBD1 1191 aaKnown RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 C19orf25Q9UFG5 118 aaPredicted RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 SESN1Q9Y6P5 492 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 LIN7AO14910 233 aaPredicted RBP12.53□□□□□ -0.4
NUP58-206ENST00000463407 BEST1O76090 585 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 PGM3O95394 542 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 HDDC2Q7Z4H3 204 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 PIM3Q86V86 326 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 HMG20AQ9NP66 347 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 KLRF1Q9NZS2 232 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 SSR3Q9UNL2 185 aa12.53□□□□□ -0.4
NUP58-206ENST00000463407 PGLSO95336 258 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 CTSAP10619 480 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 KCNJ5P48544 419 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 CDK9P50750 372 aaKnown RBP12.52□□□□□ -0.4
NUP58-206ENST00000463407 PDX1P52945 283 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 ARMC3Q5W041 872 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 KBTBD8Q8NFY9 601 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 CCNB1IP1Q9NPC3 277 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 MAFFQ9ULX9 164 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 SPATA2Q9UM82 520 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 ASNA1O43681 348 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 DNAJA2O60884 412 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 NR2F6P10588 404 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 NCK1P16333 377 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 RPL26P61254 145 aaKnown RBP12.52□□□□□ -0.4
NUP58-206ENST00000463407 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 DCAKDQ8WVC6 231 aa12.52□□□□□ -0.4
NUP58-206ENST00000463407 ZBTB11O95625 1053 aaPredicted RBP12.52□□□□□ -0.41
NUP58-206ENST00000463407 ETV3P41162 512 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 AP1S2P56377 157 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 OLIG2Q13516 323 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 PYDC2Q56P42 97 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 OR2AJ1Q8NGZ0 328 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 RAB7BQ96AH8 199 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 RNF31Q96EP0 1072 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 ART5Q96L15 291 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 C5P01031 1676 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 FADS2O95864 444 aaKnown RBP12.52□□□□□ -0.41
NUP58-206ENST00000463407 PTX3P26022 381 aaPredicted RBP12.52□□□□□ -0.41
NUP58-206ENST00000463407 CRISP3P54108 245 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 COLEC12Q5KU26 742 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 ZDHHC12Q96GR4 267 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 KIFC1Q9BW19 673 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 UTS2RQ9UKP6 389 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 LAMB4A4D0S4 1761 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 NAV1Q8NEY1 1877 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 ELOA3DA6NLF2 546 aaPredicted RBP12.52□□□□□ -0.41
NUP58-206ENST00000463407 CXorf49A8MYA2 514 aaPredicted RBP12.52□□□□□ -0.41
NUP58-206ENST00000463407 SCELO95171 688 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 GSRP00390 522 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 PREPP48147 710 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 PRKD1Q15139 912 aaPredicted RBP12.52□□□□□ -0.41
NUP58-206ENST00000463407 ELOA3BQ3SY89 546 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 METTL27Q8N6F8 245 aaPredicted RBP12.52□□□□□ -0.41
NUP58-206ENST00000463407 ELOA3Q8NG57 546 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 HM13Q8TCT9 377 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 FAM3CQ92520 227 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 OR2M4Q96R27 311 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 IL21RQ9HBE5 538 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 AK5Q9Y6K8 562 aa12.52□□□□□ -0.41
NUP58-206ENST00000463407 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
NUP58-206ENST00000463407 DUXAA6NLW8 204 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 TPD52L2O43399 206 aaKnown RBP12.51□□□□□ -0.41
NUP58-206ENST00000463407 MYCLP1P12525 358 aaPredicted RBP12.51□□□□□ -0.41
NUP58-206ENST00000463407 GPR68Q15743 365 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 SLC9B1Q4ZJI4 515 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 SPIN4Q56A73 249 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 ZNF648Q5T619 568 aaPredicted RBP12.51□□□□□ -0.41
NUP58-206ENST00000463407 FAM43BQ6ZT52 329 aaPredicted RBP12.51□□□□□ -0.41
NUP58-206ENST00000463407 KBTBD6Q86V97 674 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 CLDN19Q8N6F1 224 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 SNX33Q8WV41 574 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 WDR6Q9NNW5 1121 aaKnown RBP12.51□□□□□ -0.41
NUP58-206ENST00000463407 ZDHHC18Q9NUE0 388 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 HRASLS2Q9NWW9 162 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 CCNB2O95067 398 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 SRPRAP08240 638 aaKnown RBP12.51□□□□□ -0.41
NUP58-206ENST00000463407 ZNF823P16415 610 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 CDH12P55289 794 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 CREB5Q02930 508 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 PCBP2Q15366 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
NUP58-206ENST00000463407 GPRIN1Q7Z2K8 1008 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 ANKLE1Q8NAG6 615 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 WDR92Q96MX6 357 aa12.51□□□□□ -0.41
NUP58-206ENST00000463407 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms