RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TFF3Q07654 80 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 PTPRCAPQ14761 206 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 SLC1A5Q15758 541 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 PPP2R5EQ16537 467 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 TEX44Q53QW1 395 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 IRAK1BP1Q5VVH5 260 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 UNC5AQ6ZN44 842 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 TTLL10Q6ZVT0 673 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 TGIF2LYQ8IUE0 185 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 CFAP206Q8IYR0 622 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 DTWD1Q8N5C7 304 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 CCNYQ8ND76 341 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 ZNF398Q8TD17 642 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 BRIX1Q8TDN6 353 aaKnown RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 THAP3Q8WTV1 239 aaPredicted RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 PHF10Q8WUB8 498 aaKnown RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 CHTF18Q8WVB6 975 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 DLG3Q92796 817 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 RBM41Q96IZ5 413 aaKnown RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 TEKT5Q96M29 485 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 RNF157Q96PX1 679 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 FERD3LQ96RJ6 166 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 DMRTA2Q96SC8 542 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 FOXC2Q99958 501 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 HGH1Q9BTY7 390 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 MENTQ9BUN1 341 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 THAP2Q9H0W7 228 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 SOX17Q9H6I2 414 aaPredicted RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 ZNF160Q9HCG1 818 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 EURLQ9NYK6 297 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 UBP1Q9NZI7 540 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 HACD3Q9P035 362 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 FAM8A1Q9UBU6 413 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 PLCL2Q9UPR0 1127 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 RPH3AQ9Y2J0 694 aaPredicted RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 ZNF407Q9C0G0 2248 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 A0A0A6YYK5 440 aaPredicted RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 DYTNA2CJ06 578 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 FANCGO15287 622 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 BUD23O43709 281 aaKnown RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 SRP72O76094 671 aaKnown RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 WDPCPO95876 746 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 TPM2P07951 284 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 CELA2AP08217 269 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 FDXRP22570 491 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 ACADLP28330 430 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 DNAJA1P31689 397 aaKnown RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 ARSFP54793 590 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 WNT3AP56704 352 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 FANCCQ00597 558 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 PMP22Q01453 160 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 RBPJQ06330 500 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 KLC1Q07866 573 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 WASHC5Q12768 1159 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 RPA4Q13156 261 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 MSLNQ13421 630 aaPredicted RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 RBBP7Q16576 425 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 ARSJQ5FYB0 599 aaPredicted RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 YOD1Q5VVQ6 348 aaPredicted RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 MEX3BQ6ZN04 569 aaKnown RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 SHISA6Q6ZSJ9 500 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 GLT6D1Q7Z4J2 308 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 VSIG1Q86XK7 387 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 SIAH3Q8IW03 269 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 KBTBD2Q8IY47 623 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 AMER2Q8N7J2 671 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 PHC3Q8NDX5 983 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 OR5AR1Q8NGP9 310 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 RAPGEF5Q92565 580 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 N4BP2L2Q92802 583 aaPredicted RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 C8orf44Q96CB5 159 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 OXNAD1Q96HP4 312 aaPredicted RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 GPR137Q96N19 417 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 GORASP1Q9BQQ3 440 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 GSX1Q9H4S2 264 aaPredicted RBP7.36□□□□□ -1.23
SMC3-202ENST00000462899 OR6C2Q9NZP2 312 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 PTGFRNQ9P2B2 879 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 FAM153AQ9UHL3 310 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 NENFQ9UMX5 172 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 PCDHGB6Q9Y5F9 930 aa7.36□□□□□ -1.23
SMC3-202ENST00000462899 IGHV1-45A0A0A0MS14 117 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 TRBV5-4A0A0C4DH59 114 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 ASPDHA6ND91 283 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 TMEM200CA6NKL6 621 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 WIPF1O43516 503 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 PRAMEF2O60811 474 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 BMP10O95393 424 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 SERPINA7P05543 415 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 ATP1B2P14415 290 aaPredicted RBP7.35□□□□□ -1.23
SMC3-202ENST00000462899 ACPPP15309 386 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 MAGP20916 626 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 CDK11BP21127 795 aaKnown RBP7.35□□□□□ -1.23
SMC3-202ENST00000462899 KDELR1P24390 212 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 MCM3P25205 808 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 SHMT2P34897 504 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 EFNA3P52797 238 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 IST1P53990 364 aa7.35□□□□□ -1.23
SMC3-202ENST00000462899 PSMA6P60900 246 aaKnown RBP7.35□□□□□ -1.23
SMC3-202ENST00000462899 AP1B1Q10567 949 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms