RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 MCM3P25205 808 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 PKLRP30613 574 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 SOX11P35716 441 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 CA7P43166 264 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 OR1D4P47884 311 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 ATP5OP48047 213 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 TNFSF10P50591 281 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 RAB28P51157 221 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 CACNG1Q06432 222 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 ITIH4Q14624 930 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 BRD3Q15059 726 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 ZC3H12BQ5HYM0 836 aaKnown RBP10.38□□□□□ -0.75
CBX3-205ENST00000462165 ATG9BQ674R7 924 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 MTFR2Q6P444 385 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 GFRALQ6UXV0 394 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 PACS1Q6VY07 963 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 RPTNQ6XPR3 784 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 BBS12Q6ZW61 710 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 LUZP1Q86V48 1076 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 KATNAL2Q8IYT4 538 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 RCOR2Q8IZ40 523 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 TTC29Q8NA56 475 aaPredicted RBP10.38□□□□□ -0.75
CBX3-205ENST00000462165 LINC01555Q8NAE3 123 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 OR8K1Q8NGG5 319 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 HAS2Q92819 552 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 SLC22A18Q96BI1 424 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 CDKN2AIPNLQ96HQ2 116 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 MAGEB10Q96LZ2 347 aaPredicted RBP10.38□□□□□ -0.75
CBX3-205ENST00000462165 PPP1R2P1Q96PQ5 205 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 FERMT1Q9BQL6 677 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 MENTQ9BUN1 341 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 TRIM8Q9BZR9 551 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 ZNF160Q9HCG1 818 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 SPTLC3Q9NUV7 552 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 INTS7Q9NVH2 962 aaKnown RBP10.38□□□□□ -0.75
CBX3-205ENST00000462165 SMARCAL1Q9NZC9 954 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 KLHL20Q9Y2M5 609 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 ALG6Q9Y672 507 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 PRSS21Q9Y6M0 314 aa10.38□□□□□ -0.75
CBX3-205ENST00000462165 DYTNA2CJ06 578 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 MAP2K7O14733 419 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 S1PR4O95977 384 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 SNRPB2P08579 225 aaKnown RBP10.37□□□□□ -0.75
CBX3-205ENST00000462165 ACPPP15309 386 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 FDXRP22570 491 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 HADHBP55084 474 aaKnown RBP10.37□□□□□ -0.75
CBX3-205ENST00000462165 KLC1Q07866 573 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.37□□□□□ -0.755e-25■□□□□ 10.5
CBX3-205ENST00000462165 FAM214AQ32MH5 1076 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 KRTAP21-3Q3LHN1 58 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 SYTL3Q4VX76 610 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 XKRXQ6PP77 449 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 FIGLAQ6QHK4 219 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 TMEM207Q6UWW9 146 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 NAPRTQ6XQN6 538 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 NLRP9Q7RTR0 991 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 CCDC50Q8IVM0 306 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 KBTBD2Q8IY47 623 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 CCDC168Q8NDH2 2452 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 DNAJB8Q8NHS0 232 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 CCDC110Q8TBZ0 833 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 STT3BQ8TCJ2 826 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 STYXQ8WUJ0 223 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 PSMF1Q92530 271 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 LRRC45Q96CN5 670 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 CHP1Q99653 195 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 SELENOSQ9BQE4 189 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 MESP1Q9BRJ9 268 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 CRB3Q9BUF7 120 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 HEMGNQ9BXL5 484 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
CBX3-205ENST00000462165 PLA2G3Q9NZ20 509 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 IFNKQ9P0W0 207 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.37□□□□□ -0.75
CBX3-205ENST00000462165 ABI3Q9P2A4 366 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 PTGFRNQ9P2B2 879 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 ITGB1BP2Q9UKP3 347 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 INTUQ9ULD6 942 aa10.37□□□□□ -0.75
CBX3-205ENST00000462165 CACNA1CQ13936 2221 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 NSG1A0A0A6YYJ2 146 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 A0A1W2PQ72 361 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 TARM1B6A8C7 271 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 KCNN4O15554 427 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 SRPX2O60687 465 aaPredicted RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 UNC5CO95185 931 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 FKBP9O95302 570 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 ZGLP1P0C6A0 271 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 OR56A5P0C7T3 313 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 PRR35P0CG20 571 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 COX6A1P12074 109 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 AGAP20933 346 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 CD9P21926 228 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 PSMA3P25788 255 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 GRIA3P42263 894 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 MARCKSL1P49006 195 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 OCA2Q04671 838 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 SPARCL1Q14515 664 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 TESK1Q15569 626 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 DNAJC21Q5F1R6 531 aaKnown RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 VWA2Q5GFL6 755 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms