RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 FANCEQ9HB96 536 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 C1GALT1Q9NS00 363 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 STARD5Q9NSY2 213 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TUBD1Q9UJT1 453 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 IGHV5-51A0A0C4DH38 117 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FAM159BA6NKW6 160 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 BTN3A1O00481 513 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 NKX2-8O15522 239 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ZBTB14O43829 449 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ZBTB11O95625 1053 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CDH3P22223 829 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 MCM3P25205 808 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC12A2P55011 1212 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 POLE2P56282 527 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GPX6P59796 221 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 IL2P60568 153 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CDC20Q12834 499 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KCNAB2Q13303 367 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 NAB1Q13506 487 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KIR2DS3Q14952 304 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLMAPQ14BN4 828 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GRTP1Q5TC63 336 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 C16orf46Q6P387 395 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ATG14Q6ZNE5 492 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ZC3HC1Q86WB0 502 aaKnown RBP12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ADGRF3Q8IZF5 1079 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 OR8K5Q8NH50 307 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CD200R1Q8TD46 325 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FBF1Q8TES7 1133 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 APOBEC4Q8WW27 367 aaKnown RBP12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC41A2Q96JW4 573 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC30A3Q99726 388 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 MAP3K3Q99759 626 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RHOJQ9H4E5 214 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SOHLH2Q9NX45 425 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SEMA5BQ9P283 1151 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC17A6Q9P2U8 582 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ICKQ9UPZ9 632 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 MED16Q9Y2X0 877 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PSAT1Q9Y617 370 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 NFS1Q9Y697 457 aa12.8□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FAM95CA0A1B0GW59 222 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ISM1B1AKI9 464 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 BTN3A3O00478 584 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RASGRF2O14827 1237 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KATNA1O75449 491 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PSIP1O75475 530 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CHRM5P08912 532 aaPredicted RBP12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PRDX3P30048 256 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SPRP35270 261 aaPredicted RBP12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 HSD17B2P37059 387 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GP5P40197 560 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KPNA2P52292 529 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CDKN2DP55273 166 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 POU4F1Q01851 419 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KBTBD12Q3ZCT8 623 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RBM20Q5T481 1227 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PAQR3Q6TCH7 311 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CYHR1Q6ZMK1 362 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CPNE9Q8IYJ1 553 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 MYO1HQ8N1T3 1032 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 OR9A1PQ8NGU1 263 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 OR2L8Q8NGY9 312 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 MCOLN3Q8TDD5 553 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ASB11Q8WXH4 323 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FGF21Q9NSA1 209 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ACTR10Q9NZ32 417 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SPATA7Q9P0W8 599 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TSR3Q9UJK0 312 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CROTQ9UKG9 612 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 POMT2Q9UKY4 750 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ANKRD12Q6UB98 2062 aa12.79□□□□□ -0.36
RAB11FIP3-207ENST00000461009 COL6A6A6NMZ7 2263 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ATMQ13315 3056 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PABPN1LA6NDY0 278 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CXorf49A8MYA2 514 aaPredicted RBP12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 C21orf140B9A014 251 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FKBP9O95302 570 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KLK3P07288 261 aaPredicted RBP12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 C8GP07360 202 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FOLR1P15328 257 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ZNF28P17035 718 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SAT1P21673 171 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FDXRP22570 491 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PKLRP30613 574 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 BDKRB1P46663 353 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PPP1CAP62136 330 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RPS15P62841 145 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KCNC4Q03721 635 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ARHGAP19Q14CB8 494 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SPESP1Q6UW49 350 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TMEM126BQ8IUX1 230 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 D2HGDHQ8N465 521 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 NKAPQ8N5F7 415 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PPM1NQ8N819 430 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FBXO15Q8NCQ5 510 aaPredicted RBP12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GIMAP7Q8NHV1 300 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 EEF1AKMT1Q8WVE0 214 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 655.6 ms