RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 PSIP1O75475 530 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 KHDRBS3O75525 346 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ALDH1A2O94788 518 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SLC2A2P11168 524 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 COX7A2P14406 83 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 HDCP19113 662 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 MATN1P21941 496 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 MAPK8P45983 427 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SLC16A1P53985 500 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 WNT3AP56704 352 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 PTSQ03393 145 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CYP2A13Q16696 494 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 PPM1JQ5JR12 505 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FSTL4Q6MZW2 842 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CGB2Q6NT52 195 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SHQ1Q6PI26 577 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 PAOXQ6QHF9 649 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CCBE1Q6UXH8 406 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 GALNT5Q7Z7M9 940 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 RTN4RL1Q86UN2 441 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 AMIGO1Q86WK6 493 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 PHTF2Q8N3S3 785 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 TMBIM1Q969X1 311 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SIGLEC10Q96LC7 697 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 COL21A1Q96P44 957 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 KIFC1Q9BW19 673 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 NPLQ9BXD5 320 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FAM126AQ9BYI3 521 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 PAQR5Q9NXK6 330 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 EIF3KQ9UBQ5 218 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 VWA7Q9Y334 891 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 DHRS7Q9Y394 339 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SNX10Q9Y5X0 201 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 METTL21EPA6NDL7 271 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CBX4O00257 560 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CXCR6O00574 342 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 RNASEH2AO75792 299 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 OR2B3O76000 313 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 UROSP10746 265 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF7P17097 686 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 AZGP1P25311 298 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CD86P42081 329 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 MAGEA2P43356 314 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ATP12AP54707 1039 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 DUS1LQ6P1R4 473 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ANKRD33Q7Z3H0 272 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 R3HCC1LQ7Z5L2 792 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 LAPTM4BQ86VI4 370 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CAND1Q86VP6 1230 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CDK20Q8IZL9 346 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SLC7A5P1Q8MH63 180 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 UMODL1-AS1Q8N2C9 162 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 LRRC58Q96CX6 371 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF597Q96LX8 424 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 OR52B2Q96RD2 323 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 OR52E6Q96RD3 313 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CNPPD1Q9BV87 410 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 TMPRSS4Q9NRS4 437 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 RASSF1Q9NS23 344 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 POLR3BQ9NW08 1133 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 NFKBIL1Q9UBC1 381 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CLCA2Q9UQC9 943 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CMAHPQ9Y471 501 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 IRAK3Q9Y616 596 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 RALGAPA2Q2PPJ7 1873 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SCN1AP35498 2009 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 A0A1B0GVM2 712 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 TCAF2A6NFQ2 919 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 TTC34A8MYJ7 566 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FAM72CH0Y354 149 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 VILLO15195 856 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SNNO75324 88 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ATP6AP2O75787 350 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 UPK1BO75841 260 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 RSL1D1O76021 490 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 TPPPO94811 219 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CYP2A7P20853 494 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 DCKP27707 260 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 SLC5A2P31639 672 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ABCG1P45844 678 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 YAP1P46937 504 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 RHOAP61586 193 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 LCP2Q13094 533 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 PWP1Q13610 501 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF267Q14586 743 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 TMEM44Q2T9K0 475 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FAM72AQ5TYM5 149 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FAM72DQ6L9T8 149 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CHRDL2Q6WN34 429 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ADAMTSL2Q86TH1 951 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FAM72BQ86X60 149 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 PLCZ1Q86YW0 608 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 HID1Q8IV36 788 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FAM109AQ8N4B1 249 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 CIDECQ96AQ7 238 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 C1GALT1C1Q96EU7 318 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 FBXL20Q96IG2 436 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 ZC3H10Q96K80 434 aaKnown RBP6.06□□□□□ -1.44
VPS13D-202ENST00000460333 HYLS1Q96M11 299 aa6.06□□□□□ -1.44
VPS13D-202ENST00000460333 C2orf49Q9BVC5 232 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms