RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PNMA8BQ9ULN7 279 aaPredicted RBP10.15□□□□□ -0.78
HERC4-207ENST00000460168 PRSS21Q9Y6M0 314 aa10.15□□□□□ -0.78
HERC4-207ENST00000460168 PIAS3Q9Y6X2 628 aa10.15□□□□□ -0.78
HERC4-207ENST00000460168 ATG2BQ96BY7 2078 aa10.15□□□□□ -0.78
HERC4-207ENST00000460168 F5P12259 2224 aa10.15□□□□□ -0.79
HERC4-207ENST00000460168 RGSL1A5PLK6 1076 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 A8MT66 165 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 PSMD11O00231 422 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 SOX1O00570 391 aaPredicted RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 WNT9AO14904 365 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 MBTPS2O43462 519 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 DNAJB5O75953 348 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 RASGRP1O95267 797 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 OCM2P0CE71 109 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 OCMP0CE72 109 aaPredicted RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 ARRB2P32121 409 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 KIR2DL1P43626 348 aaPredicted RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 SEPHS1P49903 392 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 SMAD4Q13485 552 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 PON2Q15165 354 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 WASHC2DQ5SRD0 308 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 DCDC5Q6ZRR9 648 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 NET1Q7Z628 596 aaPredicted RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 CCDC28AQ8IWP9 274 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 LINC00518Q8N0U6 118 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 TRAM1L1Q8N609 369 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 KCT2Q8NC54 265 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 RHEBL1Q8TAI7 183 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 STAG3L4Q8TBR4 150 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 AGR3Q8TD06 166 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 AP2M1Q96CW1 435 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 LINGO1Q96FE5 620 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 DCUN1D1Q96GG9 259 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 SORT1Q99523 831 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 NUSAP1Q9BXS6 441 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 TFB2MQ9H5Q4 396 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 TSR3Q9UJK0 312 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 RBMX2Q9Y388 322 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 DHRS7Q9Y394 339 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 PIKFYVEQ9Y2I7 2098 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 PLXNB3Q9ULL4 1909 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 CFAP99D6REC4 459 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 AREL1O15033 823 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 RAD51BO15315 384 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 SPINT1O43278 529 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 PI15O43692 258 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 MTX2O75431 263 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 OR56A5P0C7T3 313 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 P2RY2P41231 377 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 KCNC1P48547 511 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 CNTN1Q12860 1018 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 ENPP2Q13822 863 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 OR4D1Q15615 310 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 TSNQ15631 228 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 CST6Q15828 149 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 TIGD2Q4W5G0 525 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 FAM209BQ5JX69 171 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 MACC1Q6ZN28 852 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 DET1Q7L5Y6 550 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 PIWIL4Q7Z3Z4 852 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 TECPR1Q7Z6L1 1165 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 TSPYL5Q86VY4 417 aaPredicted RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 RALGPS2Q86X27 583 aaPredicted RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 SLC44A3Q8N4M1 653 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 KIAA1191Q96A73 305 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 FAR2Q96K12 515 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 LRRC37BQ96QE4 947 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 PANX3Q96QZ0 392 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 TMEM120AQ9BXJ8 343 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 HDAC8Q9BY41 377 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 MRPL40Q9NQ50 206 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 SMOXQ9NWM0 555 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 UCKL1Q9NWZ5 548 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 TRNAU1APQ9NX07 287 aaKnown RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 NFKBIL1Q9UBC1 381 aaPredicted RBP10.14□□□□□ -0.79
HERC4-207ENST00000460168 PLXNA2O75051 1894 aa10.14□□□□□ -0.79
HERC4-207ENST00000460168 IGLV3-16A0A075B6K0 115 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 SH3D21A4FU49 640 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 NPEPPSL1A6NEC2 478 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 CHURC1-FNTBB4DL54 471 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 SUPT3HB4E1H0 165 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 STX16-NPEPL1H3BU86 382 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 PLOD2O00469 737 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 MID1O15344 667 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 CLOCKO15516 846 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 LZTS3O60299 673 aaPredicted RBP10.13□□□□□ -0.79
HERC4-207ENST00000460168 KERAO60938 352 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 DCTN3O75935 186 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 TSPAN12O95859 305 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 FUCA1P04066 466 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 CHRNGP07510 517 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 C6P13671 934 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 GFAPP14136 432 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 ATP1B2P14415 290 aaPredicted RBP10.13□□□□□ -0.79
HERC4-207ENST00000460168 ITGAXP20702 1163 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 CXCR2P25025 360 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 NTSR1P30989 418 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 MLLT3P42568 568 aaPredicted RBP10.13□□□□□ -0.79
HERC4-207ENST00000460168 RGS4P49798 205 aa10.13□□□□□ -0.79
HERC4-207ENST00000460168 AQP5P55064 265 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms