RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 TMEM184BQ9Y519 407 aaPredicted RBP10.33□□□□□ -0.75
UBR4-208ENST00000459947 OARD1Q9Y530 152 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 STMND1H3BQB6 276 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 ACSL3O95573 720 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 TOP3BO95985 862 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 C1QAP02745 245 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 SNRPAP09012 282 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 LTA4HP09960 611 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 SPINK2P20155 84 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 EMP3P54852 163 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 MC1RQ01726 317 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 TRADDQ15628 312 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 FOXR1Q6PIV2 292 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 RAPH1Q70E73 1250 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 PIWIL4Q7Z3Z4 852 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 TTC29Q8NA56 475 aaPredicted RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 ACMSDQ8TDX5 336 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 USP7Q93009 1102 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 ISL2Q96A47 359 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 KIAA1143Q96AT1 154 aaPredicted RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 PKP4Q99569 1192 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 OLFM1Q99784 485 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 NLNQ9BYT8 704 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 NUDT4Q9NZJ9 180 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 MTO1Q9Y2Z2 717 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 PSAT1Q9Y617 370 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 A8MU76 341 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 PRPF4O43172 522 aaKnown RBP eCLIP10.33□□□□□ -0.76
UBR4-208ENST00000459947 RIPK2O43353 540 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 METTL2BQ6P1Q9 378 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 NAPRTQ6XQN6 538 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 PROSER1Q86XN7 944 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 KLHDC8AQ8IYD2 350 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 ZNF655Q8N720 491 aaPredicted RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 XKR8Q9H6D3 395 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 PCDHB3Q9Y5E6 796 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 ASXL3Q9C0F0 2248 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 SRPX2O60687 465 aaPredicted RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 SYF2O95926 243 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 PIM1P11309 404 aaPredicted RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 GSTM2P28161 218 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 SLC5A2P31639 672 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 ARSFP54793 590 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 ITGA1P56199 1179 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 SF1Q15637 639 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 TMPRSS9Q7Z410 1059 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 STAG3L4Q8TBR4 150 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 PAFAH2Q99487 392 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 PITHD1Q9GZP4 211 aaPredicted RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 MRPS30Q9NP92 439 aaKnown RBP10.33□□□□□ -0.76
UBR4-208ENST00000459947 TMEM184CQ9NVA4 438 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 ARL15Q9NXU5 204 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 TMEM9Q9P0T7 183 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 DYRK1BQ9Y463 629 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 NFS1Q9Y697 457 aa10.33□□□□□ -0.76
UBR4-208ENST00000459947 CXorf49A8MYA2 514 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 FGF3P11487 239 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 GRK3P35626 688 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 PROKR1Q8TCW9 393 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 SLC30A3Q99726 388 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 MENTQ9BUN1 341 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 TXLNGYQ9BZA5 131 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 PSMC3IPQ9P2W1 217 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 PDE10AQ9Y233 779 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 UNC13CQ8NB66 2214 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 SLC9B1P1A6NJY1 282 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 PRICKLE3O43900 615 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 CPNE3O75131 537 aaKnown RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 ERLIN1O75477 346 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 WISP3O95389 354 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 RBP1P09455 135 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 SAT1P21673 171 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 CXCR2P25025 360 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 TYK2P29597 1187 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 NAA20P61599 178 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 FOXM1Q08050 763 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 UAP1Q16222 522 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 PRAMEF13Q5VWM6 474 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 SULT1C3Q6IMI6 304 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 NIPAL1Q6NVV3 410 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 FIGLAQ6QHK4 219 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 TIFABQ6ZNK6 161 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 MICALCLQ6ZW33 695 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 C17orf64Q86WR6 236 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 KIAA1191Q96A73 305 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 STOX2Q9P2F5 926 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 GALPQ9UBC7 116 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 PRAMEF33A0A0G2JMD5 474 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 TSPAN12O95859 305 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 PIK3CGP48736 1102 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 SEPHS1P49903 392 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 TIAL1Q01085 375 aaKnown RBP eCLIP10.32□□□□□ -0.76
UBR4-208ENST00000459947 THEMIS2Q5TEJ8 643 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 AGTRAPQ6RW13 159 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 RHEBL1Q8TAI7 183 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 JPH3Q8WXH2 748 aaPredicted RBP10.32□□□□□ -0.76
UBR4-208ENST00000459947 FAM136AQ96C01 138 aa10.32□□□□□ -0.76
UBR4-208ENST00000459947 SEC16BQ96JE7 1060 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms