RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 VRK3Q8IV63 474 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 ZDHHC21Q8IVQ6 265 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 ADHFE1Q8IWW8 467 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 GPR26Q8NDV2 337 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 SKA2Q8WVK7 121 aaPredicted RBP13.79□□□□□ -0.2
SCFD1-203ENST00000458591 SELENOMQ8WWX9 145 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 RDH12Q96NR8 316 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 VN1R3Q9BXE9 311 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 KLF16Q9BXK1 252 aaPredicted RBP13.79□□□□□ -0.2
SCFD1-203ENST00000458591 PARVBQ9HBI1 364 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 MAGEE1Q9HCI5 957 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 RASSF1Q9NS23 344 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 TMEM45AQ9NWC5 275 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 RNF186Q9NXI6 227 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 FAM8A1Q9UBU6 413 aa13.79□□□□□ -0.2
SCFD1-203ENST00000458591 FRMPD3Q5JV73 1810 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 NUP214P35658 2090 aaPredicted RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 ZNF99A8MXY4 864 aaPredicted RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 KPNA4O00629 521 aaPredicted RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 STK16O75716 305 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 MAGEA10P43363 369 aaPredicted RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 NRIP1P48552 1158 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 MASP1P48740 699 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 CPZQ66K79 652 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 CHST9Q7L1S5 443 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 SNX20Q7Z614 316 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 SLCO6A1Q86UG4 719 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 ZCCHC7Q8N3Z6 543 aaKnown RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 SVOPLQ8N434 492 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 RPL3LQ92901 407 aaKnown RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 USP7Q93009 1102 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 APOLD1Q96LR9 279 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 PNMA8BQ9ULN7 279 aaPredicted RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 OR51B4Q9Y5P0 310 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 PMF1-BGLAPU3KQ54 211 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 GLYATL1P3A0A0U1RQE8 302 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 TMEM247A6NEH6 219 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 MTX2O75431 263 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 ANGPTL1O95841 491 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 EBLN1P0CF75 366 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 CCR7P32248 378 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 S100A3P33764 101 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 FCGRTP55899 365 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 NCS1P62166 190 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 SMAD3P84022 425 aaKnown RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 OCA2Q04671 838 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 NPTX1Q15818 432 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 CDKN3Q16667 212 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 TRIM16LQ309B1 348 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 Q6ZPB1 254 aaPredicted RBP13.78□□□□□ -0.2
SCFD1-203ENST00000458591 OR7A2PQ8NGA2 310 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 CDC26Q8NHZ8 85 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 ALG14Q96F25 216 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 NTMT1Q9BV86 223 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 ARL15Q9NXU5 204 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 C3orf18Q9UK00 162 aa13.78□□□□□ -0.2
SCFD1-203ENST00000458591 NPIPB15A6NHN6 443 aaPredicted RBP13.77□□□□□ -0.21
SCFD1-203ENST00000458591 ZBBXA8MT70 800 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 YY2O15391 372 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 CLDN9O95484 217 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 FADS2O95864 444 aaKnown RBP13.77□□□□□ -0.21
SCFD1-203ENST00000458591 TRBC1P01850 177 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 RPLP2P05387 115 aaKnown RBP13.77□□□□□ -0.21
SCFD1-203ENST00000458591 SDC1P18827 310 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 ITPKAP23677 461 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 IGFBP5P24593 272 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 RPIAP49247 311 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 CASP9P55211 416 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 GABARAPL2P60520 117 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 VLDLRP98155 873 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 B4GALNT1Q00973 533 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
SCFD1-203ENST00000458591 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 AADATQ8N5Z0 425 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 PLD4Q96BZ4 506 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 BBS2Q9BXC9 721 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 ATG10Q9H0Y0 220 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 POLE4Q9NR33 117 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 SIRT5Q9NXA8 310 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 TRPM5Q9NZQ8 1165 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 MTRRQ9UBK8 725 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 ITGB1BP2Q9UKP3 347 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 PCDHGA10Q9Y5H3 936 aa13.77□□□□□ -0.21
SCFD1-203ENST00000458591 FAM220BPB1ANY3 271 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 UGT2B11O75310 529 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ITGALP20701 1170 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 NKX3-2P78367 333 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 GSTM4Q03013 218 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 RGMBQ6NW40 437 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CERS6Q6ZMG9 384 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 LRRC8DQ7L1W4 858 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CLECL1Q8IZS7 167 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ARL14EPQ8N8R7 260 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ADAMTS19Q8TE59 1207 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 UPF1Q92900 1129 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 FOXJ1Q92949 421 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms