RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 AKIRIN1Q9H9L7 192 aaPredicted RBP18.01■□□□□ 0.47
USP39-209ENST00000458268 TAS2R13Q9NYV9 303 aa18.01■□□□□ 0.47
USP39-209ENST00000458268 WHRNQ9P202 907 aa18.01■□□□□ 0.47
USP39-209ENST00000458268 CDC23Q9UJX2 597 aa18.01■□□□□ 0.47
USP39-209ENST00000458268 PCM1Q15154 2024 aa18.01■□□□□ 0.47
USP39-209ENST00000458268 CACNA1GO43497 2377 aa18.01■□□□□ 0.47
USP39-209ENST00000458268 ERVH48-1M5A8F1 160 aa18■□□□□ 0.47
USP39-209ENST00000458268 HCRTR1O43613 425 aa18■□□□□ 0.47
USP39-209ENST00000458268 PIAS1O75925 651 aa18■□□□□ 0.47
USP39-209ENST00000458268 OR2B3O76000 313 aa18■□□□□ 0.47
USP39-209ENST00000458268 MATN4O95460 622 aa18■□□□□ 0.47
USP39-209ENST00000458268 AHSGP02765 367 aa18■□□□□ 0.47
USP39-209ENST00000458268 CTSBP07858 339 aa18■□□□□ 0.47
USP39-209ENST00000458268 GABRB3P28472 473 aa18■□□□□ 0.47
USP39-209ENST00000458268 OAS2P29728 719 aaKnown RBP18■□□□□ 0.47
USP39-209ENST00000458268 CDKN2DP55273 166 aa18■□□□□ 0.47
USP39-209ENST00000458268 RPS18P62269 152 aaKnown RBP18■□□□□ 0.47
USP39-209ENST00000458268 MGAT5Q09328 741 aa18■□□□□ 0.47
USP39-209ENST00000458268 GPS2Q13227 327 aa18■□□□□ 0.47
USP39-209ENST00000458268 PTCHD3Q3KNS1 767 aa18■□□□□ 0.47
USP39-209ENST00000458268 C1orf189Q5VU69 101 aa18■□□□□ 0.47
USP39-209ENST00000458268 STEAP4Q687X5 459 aa18■□□□□ 0.47
USP39-209ENST00000458268 UGT3A1Q6NUS8 523 aa18■□□□□ 0.47
USP39-209ENST00000458268 UBE2R2Q712K3 238 aaPredicted RBP18■□□□□ 0.47
USP39-209ENST00000458268 PALM2Q8IXS6 379 aa18■□□□□ 0.47
USP39-209ENST00000458268 DENND1AQ8TEH3 1009 aa18■□□□□ 0.47
USP39-209ENST00000458268 PYROXD1Q8WU10 500 aa18■□□□□ 0.47
USP39-209ENST00000458268 EEF1AKMT1Q8WVE0 214 aa18■□□□□ 0.47
USP39-209ENST00000458268 SLC45A3Q96JT2 553 aa18■□□□□ 0.47
USP39-209ENST00000458268 PKP4Q99569 1192 aa18■□□□□ 0.47
USP39-209ENST00000458268 SLC12A9Q9BXP2 914 aa18■□□□□ 0.47
USP39-209ENST00000458268 INTS7Q9NVH2 962 aaKnown RBP18■□□□□ 0.47
USP39-209ENST00000458268 SPATA7Q9P0W8 599 aa18■□□□□ 0.47
USP39-209ENST00000458268 IGSF10Q6WRI0 2623 aa18■□□□□ 0.47
USP39-209ENST00000458268 ESYT3A0FGR9 886 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 ATXN7O15265 892 aaPredicted RBP17.99■□□□□ 0.47
USP39-209ENST00000458268 TP73O15350 636 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 ZNF749O43361 778 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 PSIP1O75475 530 aaKnown RBP17.99■□□□□ 0.47
USP39-209ENST00000458268 KLK3P07288 261 aaPredicted RBP17.99■□□□□ 0.47
USP39-209ENST00000458268 MPC1LP0DKB6 136 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 ENO3P13929 434 aaPredicted RBP17.99■□□□□ 0.47
USP39-209ENST00000458268 RPA3P35244 121 aaPredicted RBP17.99■□□□□ 0.47
USP39-209ENST00000458268 RGS4P49798 205 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 ERV3-1Q14264 604 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 THEMIS2Q5TEJ8 643 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 DUPD1Q68J44 220 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 KIAA0408Q6ZU52 694 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 STRA8Q7Z7C7 330 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 SYTL1Q8IYJ3 562 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 MYO1HQ8N1T3 1032 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 ZNF655Q8N720 491 aaPredicted RBP17.99■□□□□ 0.47
USP39-209ENST00000458268 SLC38A9Q8NBW4 561 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 ALKBH8Q96BT7 664 aaKnown RBP17.99■□□□□ 0.47
USP39-209ENST00000458268 LINGO1Q96FE5 620 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 FCRL4Q96PJ5 515 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 SYTL2Q9HCH5 934 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 GRHL1Q9NZI5 618 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 PCDHB3Q9Y5E6 796 aa17.99■□□□□ 0.47
USP39-209ENST00000458268 CDC14CA4D256 554 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 PABPN1LA6NDY0 278 aaKnown RBP17.98■□□□□ 0.47
USP39-209ENST00000458268 ZBTB14O43829 449 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 SSTR1P30872 391 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 CDC20Q12834 499 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 SLC9A5Q14940 896 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 TRADDQ15628 312 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 TBR1Q16650 682 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 DEFB109BQ30KR1 87 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 HECTD2Q5U5R9 776 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 FIGLAQ6QHK4 219 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 PAQR3Q6TCH7 311 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 CNTN4Q8IWV2 1026 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 SNRNP27Q8WVK2 155 aaKnown RBP17.98■□□□□ 0.47
USP39-209ENST00000458268 TTC9Q92623 222 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 TWSG1Q9GZX9 223 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 CHST8Q9H2A9 424 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 NDOR1Q9UHB4 597 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 PLCL2Q9UPR0 1127 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 PSAT1Q9Y617 370 aa17.98■□□□□ 0.47
USP39-209ENST00000458268 MGAQ8IWI9 3026 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 E7ESA3 106 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 FAM87AP0C7U9 286 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 CBSLP0DN79 551 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 CMPK1P30085 196 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 CBSP35520 551 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 PNLIPRP1P54315 467 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 RPS15P62841 145 aaKnown RBP17.97■□□□□ 0.47
USP39-209ENST00000458268 YBX1P67809 324 aaKnown RBP17.97■□□□□ 0.47
USP39-209ENST00000458268 MC1RQ01726 317 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 WHAMMP3Q1A5X7 153 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 FAM45BPQ6NSW5 357 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 PCSK4Q6UW60 755 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 NEK10Q6ZWH5 1172 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 ADCK2Q7Z695 626 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 FAM45AQ8TCE6 357 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 SMPDL3AQ92484 453 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 LRRC1Q9BTT6 524 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 ACTL8Q9H568 366 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 STARD5Q9NSY2 213 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 TXLNGQ9NUQ3 528 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms