RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 CACNA2D1P54289 1103 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 SRP54P61011 504 aaKnown RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 RPS7P62081 194 aaKnown RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 POU6F2P78424 691 aaPredicted RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 CCDC15Q0P6D6 951 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 ALX1Q15699 326 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 MYLK3Q32MK0 819 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 ZNF362Q5T0B9 420 aaPredicted RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 ANKRD40Q6AI12 368 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 CYB5D1Q6P9G0 228 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 FAM198BQ6UWH4 519 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 C4orf50Q6ZRC1 276 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 WDR53Q7Z5U6 358 aaPredicted RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 CLNKQ7Z7G1 428 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 ZSCAN30Q86W11 494 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 ERC1Q8IUD2 1116 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 ASB12Q8WXK4 309 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 LRRC46Q96FV0 321 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 PDLIM2Q96JY6 352 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 C8orf48Q96LL4 319 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 LRFN5Q96NI6 719 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 DACH2Q96NX9 599 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 VRK1Q99986 396 aaPredicted RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 AIFM2Q9BRQ8 373 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 SPATA5L1Q9BVQ7 753 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 SPZ1Q9BXG8 430 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 LHPPQ9H008 270 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 TCF7L1Q9HCS4 588 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 RLIMQ9NVW2 624 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 KCTD5Q9NXV2 234 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 CTTNBP2NLQ9P2B4 639 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 WRAP73Q9P2S5 460 aaPredicted RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 SLC25A13Q9UJS0 675 aa4.53□□□□□ -1.68
CDKN3-205ENST00000458126 NOCTQ9UK39 431 aaKnown RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 EIF3LQ9Y262 564 aaKnown RBP4.53□□□□□ -1.68
CDKN3-205ENST00000458126 IGHV4-30-2A0A087WSY4 118 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 E7ENX8 843 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 F8VP50 259 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 CCDC188H7C350 402 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 OR10H2O60403 315 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 DKC1O60832 514 aaKnown RBP eCLIP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 DTNBO60941 627 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 SOCS5O75159 536 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 PROP1O75360 226 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 PSMD10O75832 226 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 IGLV2-14P01704 120 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 FGF1P05230 155 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 CALM1P0DP23 149 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 CALM2P0DP24 149 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 CALM3P0DP25 149 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 ZNF30P17039 623 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 BDNFP23560 247 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 ACAT1P24752 427 aaKnown RBP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 YWHABP31946 246 aaKnown RBP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 CD70P32970 193 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 PEX5P50542 639 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 MRPS35P82673 323 aaKnown RBP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 SORDQ00796 357 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 PIGFQ07326 219 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 DYRK1AQ13627 763 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 XKR9Q5GH70 373 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 IFIT1BQ5T764 474 aaKnown RBP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 FAM171BQ6P995 826 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 ZBTB46Q86UZ6 589 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 TBC1D10CQ8IV04 446 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 FAM217AQ8IXS0 508 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 FAM186BQ8IYM0 893 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 TMIEQ8NEW7 156 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 OR10Q1Q8NGQ4 319 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 OR8D1Q8WZ84 308 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 SCAMP4Q969E2 229 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 HSPBAP1Q96EW2 488 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 ANGPTL4Q9BY76 406 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 IMPG2Q9BZV3 1241 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 POLR3FQ9H1D9 316 aaPredicted RBP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 SPATS2LQ9NUQ6 558 aaKnown RBP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 INTS13Q9NVM9 706 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 VSX1Q9NZR4 365 aaPredicted RBP4.52□□□□□ -1.69
CDKN3-205ENST00000458126 SLCO3A1Q9UIG8 710 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 SLC45A2Q9UMX9 530 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 CDYLQ9Y232 598 aa4.52□□□□□ -1.69
CDKN3-205ENST00000458126 VWA3AA6NCI4 1184 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 K7EIL1 84 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 ALOX15BO15296 676 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 KLF7O75840 302 aaPredicted RBP4.51□□□□□ -1.69
CDKN3-205ENST00000458126 ONECUT2O95948 504 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 TNFP01375 233 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 KLK3P07288 261 aaPredicted RBP4.51□□□□□ -1.69
CDKN3-205ENST00000458126 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
CDKN3-205ENST00000458126 ATP5C1P36542 298 aaKnown RBP4.51□□□□□ -1.69
CDKN3-205ENST00000458126 CSKP41240 450 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 FOLR3P41439 243 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 ASCL1P50553 236 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 ANXA11P50995 505 aaKnown RBP4.51□□□□□ -1.69
CDKN3-205ENST00000458126 NEK2P51955 445 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 GSDMDP57764 484 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 SRSF4Q08170 494 aaKnown RBP4.51□□□□□ -1.69
CDKN3-205ENST00000458126 SGCGQ13326 291 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 NCF4Q15080 339 aa4.51□□□□□ -1.69
CDKN3-205ENST00000458126 MPPE1Q53F39 396 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms