RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PGAM1P18669 254 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 CLCN7P51798 805 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 NCF4Q15080 339 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 TTLL9Q3SXZ7 439 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 LACTB2Q53H82 288 aaPredicted RBP20.41■□□□□ 0.86
HMGB3-205ENST00000455596 ZC3H12BQ5HYM0 836 aaKnown RBP20.41■□□□□ 0.86
HMGB3-205ENST00000455596 PAPD7Q5XG87 772 aaKnown RBP20.41■□□□□ 0.86
HMGB3-205ENST00000455596 FIGLAQ6QHK4 219 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 ZNF655Q8N720 491 aaPredicted RBP20.41■□□□□ 0.86
HMGB3-205ENST00000455596 PROKR1Q8TCW9 393 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 NAPGQ99747 312 aaPredicted RBP20.41■□□□□ 0.86
HMGB3-205ENST00000455596 C17orf62Q9BQA9 187 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 FAM167BQ9BTA0 163 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 TXLNGQ9NUQ3 528 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 FBXO5Q9UKT4 447 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 PADI2Q9Y2J8 665 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 COMMD10Q9Y6G5 202 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 NUP210LQ5VU65 1888 aa20.41■□□□□ 0.86
HMGB3-205ENST00000455596 KRT87PA6NCN2 255 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 PSIP1O75475 530 aaKnown RBP20.4■□□□□ 0.86
HMGB3-205ENST00000455596 F7P08709 466 aaPredicted RBP20.4■□□□□ 0.86
HMGB3-205ENST00000455596 PTGIRP43119 386 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 FCRL6Q6DN72 434 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 ANKRD12Q6UB98 2062 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 SYDE1Q6ZW31 735 aaPredicted RBP20.4■□□□□ 0.86
HMGB3-205ENST00000455596 NEK10Q6ZWH5 1172 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 KCNMB4Q86W47 210 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 GABPB2Q8TAK5 448 aaPredicted RBP20.4■□□□□ 0.86
HMGB3-205ENST00000455596 DENND1AQ8TEH3 1009 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 KCNJ9Q92806 393 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 ZUFSPQ96AP4 578 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 ZNF462Q96JM2 2506 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 RUNDC3BQ96NL0 473 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 NDC1Q9BTX1 674 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 DHRS4Q9BTZ2 278 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 FAM114A2Q9NRY5 505 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 HEATR5BQ9P2D3 2071 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 KLHL42Q9P2K6 505 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 SAR1BQ9Y6B6 198 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 CFAP46Q8IYW2 2715 aa20.4■□□□□ 0.86
HMGB3-205ENST00000455596 ARHGEF33A8MVX0 844 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 TARM1B6A8C7 271 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 CATP04040 527 aaKnown RBP20.39■□□□□ 0.85
HMGB3-205ENST00000455596 CTSBP07858 339 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 CBSLP0DN79 551 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 PSMB5P28074 263 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 CBSP35520 551 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 DHX9Q08211 1270 aaKnown RBP20.39■□□□□ 0.85
HMGB3-205ENST00000455596 CRYMQ14894 314 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 CYP2A13Q16696 494 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 HSP90AA5PQ58FG0 334 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 C1orf189Q5VU69 101 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 ZNF549Q6P9A3 640 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 CREG2Q8IUH2 290 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 MCATQ8IVS2 390 aaKnown RBP20.39■□□□□ 0.85
HMGB3-205ENST00000455596 KLHL7Q8IXQ5 586 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 OR9A1PQ8NGU1 263 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 ADAMTS17Q8TE56 1095 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 DLG3Q92796 817 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 GBP5Q96PP8 586 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 SLC30A3Q99726 388 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 MIPEPQ99797 713 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 IARS2Q9NSE4 1012 aaKnown RBP20.39■□□□□ 0.85
HMGB3-205ENST00000455596 DHCR7Q9UBM7 475 aaKnown RBP20.39■□□□□ 0.85
HMGB3-205ENST00000455596 GPN3Q9UHW5 284 aaPredicted RBP20.39■□□□□ 0.85
HMGB3-205ENST00000455596 TLK1Q9UKI8 766 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 PYCARDQ9ULZ3 195 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 TP53TG5Q9Y2B4 290 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 MED13Q9UHV7 2174 aa20.39■□□□□ 0.85
HMGB3-205ENST00000455596 MDC1Q14676 2089 aaKnown RBP20.39■□□□□ 0.85
HMGB3-205ENST00000455596 HAUS5O94927 633 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 TTC4O95801 387 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 CD63P08962 238 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 GRIA3P42263 894 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 ARSFP54793 590 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 DCDP81605 110 aaKnown RBP20.38■□□□□ 0.85
HMGB3-205ENST00000455596 MPP1Q00013 466 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 CUL1Q13616 776 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 FASTKQ14296 549 aaKnown RBP20.38■□□□□ 0.85
HMGB3-205ENST00000455596 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.38■□□□□ 0.85
HMGB3-205ENST00000455596 MLIPQ5VWP3 458 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 TCTN3Q6NUS6 607 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 OR2L3Q8NG85 312 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 OR2A1Q8NGT9 310 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 GIMAP7Q8NHV1 300 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 EBNA1BP2Q99848 306 aaKnown RBP20.38■□□□□ 0.85
HMGB3-205ENST00000455596 NAT9Q9BTE0 207 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 ACSS2Q9NR19 701 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 NDOR1Q9UHB4 597 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 ANAPC2Q9UJX6 822 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 MED16Q9Y2X0 877 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 DHRS7Q9Y394 339 aa20.38■□□□□ 0.85
HMGB3-205ENST00000455596 GCN1Q92616 2671 aaKnown RBP20.37■□□□□ 0.85
HMGB3-205ENST00000455596 A0A1W2PPV9 198 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 ARGFXA6NJG6 315 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 PYCARD-AS1I3L0S3 204 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 MYO1CO00159 1063 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 BANF1O75531 89 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 DNAJB5O75953 348 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 MPC1LP0DKB6 136 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms