RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 COL28A1Q2UY09 1125 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 KBTBD12Q3ZCT8 623 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 TMEM207Q6UWW9 146 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 CDHR3Q6ZTQ4 885 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 CEP128Q6ZU80 1094 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 TAX1BP1Q86VP1 789 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 RAB42Q8N4Z0 105 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 EEF1AKMT1Q8WVE0 214 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 LINGO1Q96FE5 620 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 FMO2Q99518 471 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 PKP4Q99569 1192 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 SLC12A9Q9BXP2 914 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 PRORYQ9H606 182 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 FAM60AQ9NP50 221 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 PDE7BQ9NP56 450 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 NINJ2Q9NZG7 142 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 MTRF1LQ9UGC7 380 aaKnown RBP13.66□□□□□ -0.22
HDAC4-205ENST00000454542 ADAMTS6Q9UKP5 1117 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 ISM1B1AKI9 464 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 TERTO14746 1132 aaKnown RBP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 SLC16A8O95907 504 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 MAGP20916 626 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 PSMB5P28074 263 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 IMPA1P29218 277 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 HSD17B2P37059 387 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 ARL4DP49703 201 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 ATP1A2P50993 1020 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 PNLIPRP1P54315 467 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 TMPRSS3P57727 454 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 FASTKQ14296 549 aaKnown RBP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 EFTUD2Q15029 972 aaKnown RBP eCLIP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 UBAP2Q5T6F2 1119 aaKnown RBP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 KIAA1614Q5VZ46 1190 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 PWWP2BQ6NUJ5 590 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 UBE2R2Q712K3 238 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 NLGN4XQ8N0W4 816 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 MYO1HQ8N1T3 1032 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 NLGN4YQ8NFZ3 816 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 OR2L3Q8NG85 312 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 OR2A1Q8NGT9 310 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 FBF1Q8TES7 1133 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 ZNF480Q8WV37 535 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 TCTN2Q96GX1 697 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 CRELD1Q96HD1 420 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 ELMO2Q96JJ3 720 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 CDC42EP4Q9H3Q1 356 aaKnown RBP13.65□□□□□ -0.22
HDAC4-205ENST00000454542 FANCEQ9HB96 536 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 PDE10AQ9Y233 779 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 PCDHB3Q9Y5E6 796 aa13.65□□□□□ -0.22
HDAC4-205ENST00000454542 ZNF839A8K0R7 811 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 E7ENX8 843 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 EFSO43281 561 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 HCRTR1O43613 425 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ZBTB14O43829 449 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 KIAA0754O94854 1291 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 CYP2A7P20853 494 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
HDAC4-205ENST00000454542 STAT5AP42229 794 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 GCGRP47871 477 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 CSRP3P50461 194 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 IL2P60568 153 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 POU4F1Q01851 419 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 TAP2Q03519 686 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ABHD18Q0P651 414 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 SRSF6Q13247 344 aaKnown RBP13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ZNF460Q14592 562 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 PHKG1Q16816 387 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 PPP1R3AQ16821 1122 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 BROXQ5VW32 411 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 FCRL6Q6DN72 434 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 SBSNQ6UWP8 590 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 CEP97Q8IW35 865 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 FAM20CQ8IXL6 584 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 DNAJC22Q8N4W6 341 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 C2orf73Q8N5S3 287 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ESX1Q8N693 406 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 OR1L3Q8NH93 324 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 HNRNPLLQ8WVV9 542 aaKnown RBP13.64□□□□□ -0.23
HDAC4-205ENST00000454542 SMPDL3AQ92484 453 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ANKRD7Q92527 254 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 LRFN5Q96NI6 719 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ZNF285Q96NJ3 590 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 CCNL2Q96S94 520 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ULBP3Q9BZM4 244 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 KLHL25Q9H0H3 589 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 ACSS3Q9H6R3 686 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 STOX2Q9P2F5 926 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-205ENST00000454542 LNPEPQ9UIQ6 1025 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 IKZF3Q9UKT9 509 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 LOC400499M0QZD8 3231 aa13.64□□□□□ -0.23
HDAC4-205ENST00000454542 TEX51A0A1B0GUA7 166 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 OR2A25A4D2G3 310 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 TMEM150CB9EJG8 249 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 K7ENP7 123 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 CPNE3O75131 537 aaKnown RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 ENO2P09104 434 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 WT1P19544 449 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms