RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 IRGQQ8WZA9 623 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 PIGBQ92521 554 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 PROX1Q92786 737 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 TANKQ92844 425 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 TMEM186Q96B77 213 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 DTD2Q96FN9 168 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 C3orf30Q96M34 536 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 ZNF560Q96MR9 790 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 FAM111AQ96PZ2 611 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 RASL10BQ96S79 203 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 ATG101Q9BSB4 218 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 SPRTNQ9H040 489 aaPredicted RBP3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 AKIRIN1Q9H9L7 192 aaPredicted RBP3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 SYTL2Q9HCH5 934 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 MRPL17Q9NRX2 175 aaKnown RBP3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 STK26Q9P289 416 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 SH3BGRL2Q9UJC5 107 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 KCNS2Q9ULS6 477 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 STRAPQ9Y3F4 350 aaKnown RBP3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 JRKLQ9Y4A0 524 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 CLCA3PQ9Y6N3 262 aa3.95□□□□□ -1.78
HMGN3P1-201ENST00000453847 C2orf92A0A1B0GVN3 265 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ILVBLA1L0T0 632 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 CTAGE9A4FU28 777 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 PRR32B1ATL7 298 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 TLR4O00206 839 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 LUC7L3O95232 432 aaKnown RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 SBK2P0C263 348 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 CTAGE8P0CG41 777 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 HSPA8P11142 646 aaKnown RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 SKILP12757 684 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 HLA-DOBP13765 273 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ETS1P14921 441 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ITGA2P17301 1181 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 DGKAP23743 735 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 C21orf33P30042 268 aaPredicted RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 RPL21P46778 160 aaKnown RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ARHGAP1Q07960 439 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 DSC1Q08554 894 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ZNF234Q14588 700 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 PRTGQ2VWP7 1150 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 EPC2Q52LR7 807 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 RD3Q7Z3Z2 195 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ASPGQ86U10 573 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 EXOC3L1Q86VI1 746 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ANKRD46Q86W74 232 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 MEX3DQ86XN8 651 aaKnown RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 CTAGE4Q8IX94 777 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 RNF113BQ8IZP6 322 aaKnown RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 RASGEF1AQ8N9B8 481 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 KIAA0895Q8NCT3 520 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 ZNF540Q8NDQ6 660 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 OR14A16Q8NHC5 309 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 CHURC1Q8WUH1 139 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 AP2M1Q96CW1 435 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 FAM71F1Q96KD3 344 aaPredicted RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 C16orf45Q96MC5 204 aaPredicted RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 FAM20AQ96MK3 541 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 GDAP1L1Q96MZ0 367 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 PKP2Q99959 881 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 CCDC3Q9BQI4 270 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 CSTL1Q9H114 145 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 SNX25Q9H3E2 840 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 RIOX1Q9H6W3 641 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 GOLGA2P5Q9HBQ8 144 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 KCNMB3Q9NPA1 279 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 INTS10Q9NVR2 710 aaKnown RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 TRNAU1APQ9NX07 287 aaKnown RBP3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 TXNDC16Q9P2K2 825 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 TBK1Q9UHD2 729 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 MAD2L2Q9UI95 211 aa3.94□□□□□ -1.78
HMGN3P1-201ENST00000453847 KIAA1217Q5T5P2 1943 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 LINC01553A4QN01 128 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CLEC18AA5D8T8 446 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 SRRM3A6NNA2 597 aaPredicted RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 E9PI62 339 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CPLX1O14810 134 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CRCPO75575 148 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 TFAP2AP05549 437 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 LIPFP07098 398 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 KRT19P08727 400 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 LINC00271P0C7V0 271 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 FAM106CPP0CH98 169 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CSF2RAP15509 400 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 FERP16591 822 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 ZNF12P17014 697 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CYP2A7P20853 494 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 DUTP33316 252 aaKnown RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 TMPOP42166 694 aaKnown RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 IER3P46695 156 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 NPBWR1P48145 328 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 THOP1P52888 689 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 TDRD12Q587J7 1177 aaKnown RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 XKR9Q5GH70 373 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CYP4A22Q5TCH4 519 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 ZNF626Q68DY1 528 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 NEK5Q6P3R8 708 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 MCM10Q7L590 875 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 MIER3Q7Z3K6 550 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms