RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RFPL3O75679 317 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 APBA3O96018 575 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 PROS1P07225 676 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 SLC1A2P43004 574 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 NRIP1P48552 1158 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 CCT3P49368 545 aaKnown RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 MAP2K6P52564 334 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 HERVK_113P63132 956 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 S100A12P80511 92 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 GRIK2Q13002 908 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 MRPL28Q13084 256 aaKnown RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 NFE2L1Q14494 772 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 HKDC1Q2TB90 917 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 UNC50Q53HI1 259 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 KANK2Q63ZY3 851 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 SPATA19Q7Z5L4 167 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 SPNS2Q8IVW8 549 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 GDPD1Q8N9F7 314 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 TTC29Q8NA56 475 aaPredicted RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 OR2T12Q8NG77 320 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 ST8SIA2Q92186 375 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 DNASE1L2Q92874 299 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 KCNA7Q96RP8 456 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 ERVK-6Q9BXR3 956 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 TRIM45Q9H8W5 580 aaPredicted RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 SLC35C2Q9NQQ7 365 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 MCUBQ9NWR8 336 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 PCDHA10Q9Y5I2 948 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 CITO14578 2027 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 A0A087WZ62 844 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 PRR23AA6NEV1 266 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 DDTLA6NHG4 134 aaPredicted RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 WASHC1A8K0Z3 465 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 AGRPO00253 132 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 STX16O14662 325 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CILPO75339 1184 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 PTP4A3O75365 173 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 STBD1O95210 358 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ITGALP20701 1170 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CYP2B6P20813 491 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 F8A1P23610 371 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 PTPN3P26045 913 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 PBX2P40425 430 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CSNK2BP67870 215 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 OLR1P78380 273 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 SLC6A3Q01959 620 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CREMQ03060 361 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ZNF273Q14593 569 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 EMC2Q15006 297 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 GRK1Q15835 563 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 KLHL12Q53G59 568 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 GNASQ5JWF2 1037 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MAP1SQ66K74 1059 aaPredicted RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 SHQ1Q6PI26 577 aaKnown RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 KDELC1Q6UW63 502 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 DLEU7Q6UYE1 221 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CCDC149Q6ZUS6 474 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 LAX1Q8IWV1 398 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 UBE2J2Q8N2K1 259 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CAMKK1Q8N5S9 505 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 UBE2FQ969M7 185 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 FAM162AQ96A26 154 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 TMEM143Q96AN5 459 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 KLHL15Q96M94 604 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 VAT1Q99536 393 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MLPHQ9BV36 600 aaPredicted RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 TMEM168Q9H0V1 697 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ALG9Q9H6U8 611 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 SETD4Q9NVD3 440 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 FAM8A1Q9UBU6 413 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 KLK4Q9Y5K2 254 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 HRH3Q9Y5N1 445 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ANKRD12Q6UB98 2062 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 FAM234BA2RU67 622 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 H0YC42 278 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MYL12BO14950 172 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 HRO43593 1189 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 PCDHGA12O60330 932 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ITGB3P05106 788 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 RRASP10301 218 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MYL12AP19105 171 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 HAAOP46952 286 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MRPL19P49406 292 aaKnown RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 ERVK-21P61565 698 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 RRAS2P62070 204 aaPredicted RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 SCRN3Q0VDG4 424 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CDH17Q12864 832 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 TP53BP2Q13625 1128 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 SEMA3AQ14563 771 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 LAPTM4AQ15012 233 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ATP6AP1LQ52LC2 224 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CACHD1Q5VU97 1274 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 KIAA1614Q5VZ46 1190 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 SAXO2Q658L1 398 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CPZQ66K79 652 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ZNF600Q6ZNG1 722 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 RNF130Q86XS8 419 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CCDC71Q8IV32 467 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms