RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 ZNF789Q5FWF6 425 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 PRAMEF17Q5VTA0 474 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 CDHR3Q6ZTQ4 885 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 PCGF5Q86SE9 256 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 CREG2Q8IUH2 290 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 SRRM1Q8IYB3 904 aaKnown RBP16.9■□□□□ 0.3
FAM3A-216ENST00000449971 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.3
FAM3A-216ENST00000449971 C19orf47Q8N9M1 422 aaKnown RBP16.9■□□□□ 0.3
FAM3A-216ENST00000449971 LMNTD1Q8N9Z9 388 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 N4BP2L2Q92802 583 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-216ENST00000449971 MR1Q95460 341 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 TCTN2Q96GX1 697 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 FOPNLQ96NB1 174 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 IL17FQ96PD4 163 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 AKIRIN1Q9H9L7 192 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-216ENST00000449971 SLAMF7Q9NQ25 335 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 LATS2Q9NRM7 1088 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 PCYOX1Q9UHG3 505 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 SLC39A10Q9ULF5 831 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 NFS1Q9Y697 457 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 PIKFYVEQ9Y2I7 2098 aa16.9■□□□□ 0.3
FAM3A-216ENST00000449971 A0A0J9YY10 115 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 E5RI56 91 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 USP1O94782 785 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 DDAH2O95865 285 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.29
FAM3A-216ENST00000449971 F7P08709 466 aaPredicted RBP16.89■□□□□ 0.29
FAM3A-216ENST00000449971 CYP2A7P20853 494 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 CD9P21926 228 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 PAFAH1B1P43034 410 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 ADARP55265 1226 aaKnown RBP16.89■□□□□ 0.29
FAM3A-216ENST00000449971 CTBP1Q13363 440 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 GRB7Q14451 532 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 IZUMO3Q5VZ72 239 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 DENND6AQ8IWF6 608 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 SLC38A9Q8NBW4 561 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 FLVCR1-AS1Q8TAF5 88 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 SLCO2A1Q92959 643 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 CLIP3Q96DZ5 547 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 SLC7A5P2Q9GIP4 190 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 ING2Q9H160 280 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 FAM60AQ9NP50 221 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 FBXO6Q9NRD1 293 aaPredicted RBP16.89■□□□□ 0.29
FAM3A-216ENST00000449971 INTS10Q9NVR2 710 aaKnown RBP16.89■□□□□ 0.29
FAM3A-216ENST00000449971 GALPQ9UBC7 116 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 RUVBL2Q9Y230 463 aaKnown RBP16.89■□□□□ 0.29
FAM3A-216ENST00000449971 PCDHGA6Q9Y5G7 932 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 LRBAP50851 2863 aa16.89■□□□□ 0.29
FAM3A-216ENST00000449971 A6NL46 340 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 C21orf140B9A014 251 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 RASGRF2O14827 1237 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 SORBS2O94875 1100 aaKnown RBP16.88■□□□□ 0.29
FAM3A-216ENST00000449971 C1orf105O95561 183 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 MSL3P1P0C860 447 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 PEBP1P30086 187 aaKnown RBP16.88■□□□□ 0.29
FAM3A-216ENST00000449971 BDKRB1P46663 353 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 ITGA1P56199 1179 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 GPS2Q13227 327 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 IL10RAQ13651 578 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 ZIC1Q15915 447 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 SLC5A12Q1EHB4 618 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 CNSTQ6PJW8 725 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 TAX1BP1Q86VP1 789 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 FAM20CQ8IXL6 584 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 ZBTB2Q8N680 514 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 LINC01555Q8NAE3 123 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.88■□□□□ 0.29
FAM3A-216ENST00000449971 OR2L8Q8NGY9 312 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 CALML6Q8TD86 181 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 RAD51AP1Q96B01 352 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 SLC22A18Q96BI1 424 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 CCDC68Q9H2F9 335 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 ACTR5Q9H9F9 607 aaPredicted RBP16.88■□□□□ 0.29
FAM3A-216ENST00000449971 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.88■□□□□ 0.29
FAM3A-216ENST00000449971 MRFAP1Q9Y605 127 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 FAM169AQ9Y6X4 670 aa16.88■□□□□ 0.29
FAM3A-216ENST00000449971 E7EQ34 232 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 MEN1O00255 615 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 PGAM1P18669 254 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 PTPN4P29074 926 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 CCNFP41002 786 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 SLC1A2P43004 574 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 RPS15P62841 145 aaKnown RBP16.87■□□□□ 0.29
FAM3A-216ENST00000449971 DR1Q01658 176 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 DHX9Q08211 1270 aaKnown RBP16.87■□□□□ 0.29
FAM3A-216ENST00000449971 UGT8Q16880 541 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 DEFB110Q30KQ9 67 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 BBS9Q3SYG4 887 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 CCSMST1Q4G0I0 132 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 ACSBG2Q5FVE4 666 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 SYDE1Q6ZW31 735 aaPredicted RBP16.87■□□□□ 0.29
FAM3A-216ENST00000449971 LMNTD2Q8IXW0 634 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 GPR135Q8IZ08 494 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 RAB42Q8N4Z0 105 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 MAGEC3Q8TD91 643 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 THAP4Q8WY91 577 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 RUNDC3BQ96NL0 473 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 MENTQ9BUN1 341 aa16.87■□□□□ 0.29
FAM3A-216ENST00000449971 RAB11FIP5Q9BXF6 653 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms