RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SYTL1Q8IYJ3 562 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 D2HGDHQ8N465 521 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 LMNTD1Q8N9Z9 388 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 ZNF248Q8NDW4 579 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 SNIP1Q8TAD8 396 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 DENND1AQ8TEH3 1009 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 SMPDL3AQ92484 453 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 N4BP2L2Q92802 583 aaPredicted RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 PDLIM5Q96HC4 596 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 CCDC138Q96M89 665 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 TRAPPC9Q96Q05 1148 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 CTRCQ99895 268 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC12A9Q9BXP2 914 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 KLHL25Q9H0H3 589 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 CAB39LQ9H9S4 337 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 INTS7Q9NVH2 962 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 SIDT1Q9NXL6 827 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 RARRES3Q9UL19 164 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 RAXQ9Y2V3 346 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 B3GALT1Q9Y5Z6 326 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 TLX3O43711 291 aaPredicted RBP13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 FKBP9O95302 570 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 TSPAN12O95859 305 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC16A8O95907 504 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 PVRP15151 417 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 FOLR1P15328 257 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 ST6GAL1P15907 406 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 PEBP1P30086 187 aaKnown RBP13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 RPA3P35244 121 aaPredicted RBP13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 MSH2P43246 934 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 MROH9Q5TGP6 573 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 TMEM207Q6UWW9 146 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 BPHLQ86WA6 291 aaPredicted RBP13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 PPP1R3BQ86XI6 285 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 GSPT2Q8IYD1 628 aaKnown RBP13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 C19orf47Q8N9M1 422 aaKnown RBP13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 HMGCLL1Q8TB92 370 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 KCNE4Q8WWG9 221 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 ANKRD7Q92527 254 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 TCTN2Q96GX1 697 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 NAF1Q96HR8 494 aaKnown RBP13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 FUT8Q9BYC5 575 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 APMAPQ9HDC9 416 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 FGF21Q9NSA1 209 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 CTNNAL1Q9UBT7 734 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 ADAMTS6Q9UKP5 1117 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 PDE10AQ9Y233 779 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 BTRCQ9Y297 605 aa13.53□□□□□ -0.24
GTF3C3-206ENST00000448539 KIF26BQ2KJY2 2108 aa13.52□□□□□ -0.24
GTF3C3-206ENST00000448539 ITPR1Q14643 2758 aa13.52□□□□□ -0.24
GTF3C3-206ENST00000448539 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 STMND1H3BQB6 276 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 PHGDHO43175 533 aaKnown RBP13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 CCNDBP1O95273 360 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ABHD2P08910 425 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ENO2P09104 434 aaPredicted RBP13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 FAM153BP0C7A2 387 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ERGP11308 486 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 TNFRSF8P28908 595 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 CRABP2P29373 138 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 CMPK1P30085 196 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 SERPINB9P50453 376 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 AP1S2P56377 157 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 FASTKQ14296 549 aaKnown RBP13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 NAA25Q14CX7 972 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 FAM153CQ494X1 144 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 UBAP2Q5T6F2 1119 aaKnown RBP13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 THEMIS2Q5TEJ8 643 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 FRA10AC1Q70Z53 315 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 OR8K5Q8NH50 307 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ZNF480Q8WV37 535 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ATL1Q8WXF7 558 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 MIPEPQ99797 713 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ANKZF1Q9H8Y5 726 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ABCF3Q9NUQ8 709 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 ARL15Q9NXU5 204 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 TLK1Q9UKI8 766 aa13.52□□□□□ -0.25
GTF3C3-206ENST00000448539 EXOC1LA0A1B0GW35 172 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 NPEPPSL1A6NEC2 478 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 RIPK2O43353 540 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 KRT38O76015 456 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 CCDC166P0CW27 439 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 LIPCP11150 499 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 FGF5P12034 268 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 MAGP20916 626 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 EIF2S3P41091 472 aaKnown RBP13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 BMPR2Q13873 1038 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 GPR19Q15760 415 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 ZKSCAN8Q15776 578 aaPredicted RBP13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 PHKG1Q16816 387 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 TAF1BQ53T94 588 aaPredicted RBP13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 LGSNQ5TDP6 509 aa13.51□□□□□ -0.25
GTF3C3-206ENST00000448539 SUSD1Q6UWL2 747 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms