RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 BTBD3Q9Y2F9 522 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 ZNF510Q9Y2H8 683 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 F5P12259 2224 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 DOCK9Q9BZ29 2069 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 PRRT4C9JH25 899 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 H6PDO95479 791 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 JAK1P23458 1154 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 MAPK8P45983 427 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 CSNK1DP48730 415 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 TXNL4AP83876 142 aaKnown RBP14.4□□□□□ -0.1
SF1-211ENST00000448404 ATP6AP1Q15904 470 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 CYP2U1Q7Z449 544 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 PTRH1Q86Y79 214 aaKnown RBP14.4□□□□□ -0.1
SF1-211ENST00000448404 CLECL1Q8IZS7 167 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 CBARPQ8N350 705 aaPredicted RBP14.4□□□□□ -0.1
SF1-211ENST00000448404 NETO1Q8TDF5 533 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 TMBIM1Q969X1 311 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 RMND5BQ96G75 393 aaPredicted RBP14.4□□□□□ -0.1
SF1-211ENST00000448404 TRIM15Q9C019 465 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 INVSQ9Y283 1065 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 A0A0C4DFX4 3053 aa14.4□□□□□ -0.1
SF1-211ENST00000448404 H3BNH8 94 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 GSTA4O15217 222 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 LDLRP01130 860 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 HIST1H2AGP0C0S8 130 aaPredicted RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 EBLN1P0CF75 366 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 HIST1H2ADP20671 130 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 EEFSECP57772 596 aaKnown RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 PFN3P60673 137 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 CTBSQ01459 385 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 TMED1Q13445 227 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 TMEM179BQ7Z7N9 219 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 MIPOL1Q8TD10 442 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 HIST1H2AHQ96KK5 128 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 BARD1Q99728 777 aaKnown RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 HIST1H2AJQ99878 128 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 MYOCQ99972 504 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 HEPHQ9BQS7 1158 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 H2AFJQ9BTM1 129 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 NTMT1Q9BV86 223 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 SEZ6LQ9BYH1 1024 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 NUMA1Q14980 2115 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 GON4LQ3T8J9 2241 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 C16orf96A6NNT2 1141 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 UPK1AO00322 258 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 CLOCKO15516 846 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 SLC16A8O95907 504 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 MSH3P20585 1137 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 XPAP23025 273 aaPredicted RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 RPS14P62263 151 aaKnown RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 C1QTNF12Q5T7M4 302 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 CACHD1Q5VU97 1274 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 TTC33Q6PID6 262 aaPredicted RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 PARS2Q7L3T8 475 aaKnown RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 DPP10Q8N608 796 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 SPPL3Q8TCT6 385 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 USP7Q93009 1102 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 OR4K3Q96R72 315 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 SLC12A9Q9BXP2 914 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 SERHLQ9NQF3 203 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 GULP1Q9UBP9 304 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 FADS3Q9Y5Q0 445 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 DGKBQ9Y6T7 804 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 H0Y858 1186 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 SLC5A2P31639 672 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 MTHFRP42898 656 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 RPS9P46781 194 aaKnown RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 FOXM1Q08050 763 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 TCEA2Q15560 299 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 CYBRD1Q53TN4 286 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 XKR6Q5GH73 641 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 COQ5Q5HYK3 327 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 TRIM46Q7Z4K8 759 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 ADGRD2Q7Z7M1 963 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 VN1R2Q8NFZ6 395 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 ZBTB18Q99592 522 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 ANKRD60Q9BZ19 345 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 RBM38Q9H0Z9 239 aaKnown RBP14.39□□□□□ -0.11
SF1-211ENST00000448404 CLMPQ9H6B4 373 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 PLAGL1Q9UM63 463 aa14.39□□□□□ -0.11
SF1-211ENST00000448404 KCNE1BA0A087WTH5 132 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 SCAMP1O15126 338 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 MAGEB3O15480 346 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 CPSF4O95639 269 aaKnown RBP14.38□□□□□ -0.11
SF1-211ENST00000448404 PTPN2P17706 415 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 HTR1EP28566 365 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 ZNF77Q15935 545 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 TMEM220Q6QAJ8 160 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 CRTC3Q6UUV7 619 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 ZNF548Q8NEK5 533 aaPredicted RBP14.38□□□□□ -0.11
SF1-211ENST00000448404 FAM162AQ96A26 154 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 MUS81Q96NY9 551 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 MRPS26Q9BYN8 205 aaKnown RBP14.38□□□□□ -0.11
SF1-211ENST00000448404 PFDN4Q9NQP4 134 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 MYRFQ9Y2G1 1151 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 CFAP20Q9Y6A4 193 aaKnown RBP14.38□□□□□ -0.11
SF1-211ENST00000448404 IGLV3-16A0A075B6K0 115 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 FGBP02675 491 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 GPIP06744 558 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 HNRNPCP07910 306 aaKnown RBP eCLIP14.38□□□□□ -0.111e-11■□□□□ 8.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms