RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 TUBB3Q13509 450 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 CYP2A13Q16696 494 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 DEFB110Q30KQ9 67 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 PWWP2BQ6NUJ5 590 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 CEACAM20Q6UY09 585 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 CDHR3Q6ZTQ4 885 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 CMC1Q7Z7K0 106 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 SYTL1Q8IYJ3 562 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 ZNF248Q8NDW4 579 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 SNIP1Q8TAD8 396 aaKnown RBP12.89□□□□□ -0.35
SNHG4-201ENST00000448190 ZNF480Q8WV37 535 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 KCNE4Q8WWG9 221 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 PITPNM3Q9BZ71 974 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 ATG10Q9H0Y0 220 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 PARVBQ9HBI1 364 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 PDE7BQ9NP56 450 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 UTP6Q9NYH9 597 aaKnown RBP12.89□□□□□ -0.35
SNHG4-201ENST00000448190 PCDHGA3Q9Y5H0 932 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 COL27A1Q8IZC6 1860 aaPredicted RBP12.89□□□□□ -0.35
SNHG4-201ENST00000448190 NPEPPSL1A6NEC2 478 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 TMEM150CB9EJG8 249 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 EIF3FO00303 357 aaPredicted RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 MAP3K7O43318 606 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 KIAA0754O94854 1291 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 TIAF1O95411 115 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 GUCA1CO95843 209 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 C8GP07360 202 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 CCDC166P0CW27 439 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 CYP2A7P20853 494 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 MAGP20916 626 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 OAS2P29728 719 aaKnown RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 RPA3P35244 121 aaPredicted RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 MLLT3P42568 568 aaPredicted RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 PMS2P54278 862 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 RAB15P59190 212 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 ACY1Q03154 408 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 CLN3Q13286 438 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 SLMAPQ14BN4 828 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 SLC5A12Q1EHB4 618 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 THEMIS2Q5TEJ8 643 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 FCRL6Q6DN72 434 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 FIGLAQ6QHK4 219 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 LRRC69Q6ZNQ3 347 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 RAPH1Q70E73 1250 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 TIPARPQ7Z3E1 657 aaKnown RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 VASH2Q86V25 355 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 KMT5CQ86Y97 462 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 SPACA3Q8IXA5 215 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 NKAPQ8N5F7 415 aaKnown RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 C19orf47Q8N9M1 422 aaKnown RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 OR2A1Q8NGT9 310 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 OR1L3Q8NH93 324 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 SMPDL3AQ92484 453 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 CRELD1Q96HD1 420 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 GPR22Q99680 433 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 RAB11FIP5Q9BXF6 653 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 ULBP3Q9BZM4 244 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 SPRTNQ9H040 489 aaPredicted RBP12.88□□□□□ -0.35
SNHG4-201ENST00000448190 ACSS3Q9H6R3 686 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 ANKZF1Q9H8Y5 726 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 SYTL2Q9HCH5 934 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 SPATA7Q9P0W8 599 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 RARRES3Q9UL19 164 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 PCDHB11Q9Y5F2 797 aa12.88□□□□□ -0.35
SNHG4-201ENST00000448190 HMX2A2RU54 273 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 E7ENX8 843 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 SLC16A5O15375 505 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 NRP2O60462 931 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 STK17BO94768 372 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 SLU7O95391 586 aaKnown RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 HIST1H2AGP0C0S8 130 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 FGF5P12034 268 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 STMN1P16949 149 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 ZNF37AP17032 561 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 HIST1H2ADP20671 130 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 IMPA1P29218 277 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 RAB10P61026 200 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 TUBB4BP68371 445 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 TAP2Q03519 686 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 NAE1Q13564 534 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 IL11RAQ14626 422 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 LRRC8EQ6NSJ5 796 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 PPP1R3BQ86XI6 285 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 GALNT6Q8NCL4 622 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 FBXO15Q8NCQ5 510 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 N4BP2L2Q92802 583 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 SLC22A18Q96BI1 424 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 ZNF501Q96CX3 271 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 TSPAN17Q96FV3 270 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 MED8Q96G25 268 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 TCTN2Q96GX1 697 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 PDLIM5Q96HC4 596 aaKnown RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 HIST1H2AHQ96KK5 128 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 CCDC138Q96M89 665 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 HIST1H2AJQ99878 128 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 H2AFJQ9BTM1 129 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms