RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 MECRQ9BV79 373 aa17.41■□□□□ 0.38
TRAPPC4-203ENST00000447216 RAB11FIP5Q9BXF6 653 aa17.41■□□□□ 0.38
TRAPPC4-203ENST00000447216 SYNDIG1Q9H7V2 258 aa17.41■□□□□ 0.38
TRAPPC4-203ENST00000447216 ACSS2Q9NR19 701 aa17.41■□□□□ 0.38
TRAPPC4-203ENST00000447216 ASB1Q9Y576 335 aa17.41■□□□□ 0.38
TRAPPC4-203ENST00000447216 DMXL1Q9Y485 3027 aa17.41■□□□□ 0.38
TRAPPC4-203ENST00000447216 CNOT1A5YKK6 2376 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 A0A1W2PPV9 198 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 GSAPA4D1B5 854 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 E7ENX8 843 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 TM9SF1O15321 606 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 KLK8O60259 260 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 ZWINTO95229 277 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 SIX3O95343 332 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 PNLIPP16233 465 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 ATP5F1P24539 256 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 ACP1P24666 158 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 PSMB5P28074 263 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 GDF5P43026 501 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 ACADVLP49748 655 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 EPHA4P54764 986 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 ALDH18A1P54886 795 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 PPP1CAP62136 330 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 TBPL1P62380 186 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 TAP2Q03519 686 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 ARHGAP19Q14CB8 494 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 PCLAFQ15004 111 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 SETDB1Q15047 1291 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 PTCHD3Q3KNS1 767 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 CDKL4Q5MAI5 379 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 OOSP2Q86WS3 158 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 MDM1Q8TC05 714 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 SMPDL3AQ92484 453 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 AHCYL2Q96HN2 611 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 MED4Q9NPJ6 270 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 HRASLS2Q9NWW9 162 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 OR6C2Q9NZP2 312 aa17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 MDC1Q14676 2089 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-203ENST00000447216 COL27A1Q8IZC6 1860 aaPredicted RBP17.39■□□□□ 0.38
TRAPPC4-203ENST00000447216 FAM221BA6H8Z2 402 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 OR5K3A6NET4 321 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 ISM1B1AKI9 464 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 TNFSF14O43557 240 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 CCNT2O60583 730 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 RPLP0P05388 317 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 CD1CP29017 333 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 ALDH3A1P30838 453 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 HSD17B2P37059 387 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 HNMTP50135 292 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 WDR4P57081 412 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 PPP2R2AP63151 447 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 CFHR1Q03591 330 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 GPS2Q13227 327 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 USP53Q70EK8 1073 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 RPS27LQ71UM5 84 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 C10orf107Q8IVU9 208 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 FAM20CQ8IXL6 584 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 TCAIMQ8N3R3 496 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 OR56A3Q8NH54 315 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 HMGCLL1Q8TB92 370 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 RDH11Q8TC12 318 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 NCSTNQ92542 709 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 MOCOSQ96EN8 888 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 PAIP2Q9BPZ3 127 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 ACAT2Q9BWD1 397 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 NKIRAS1Q9NYS0 192 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 ACTR10Q9NZ32 417 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 COPG2Q9UBF2 871 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 MID2Q9UJV3 735 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 ATXN7L1Q9ULK2 861 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 TMCO1Q9UM00 188 aa17.39■□□□□ 0.37
TRAPPC4-203ENST00000447216 KIF26BQ2KJY2 2108 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 A0A1W2PQM1 296 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 PIPSLA2A3N6 862 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 WDR91A4D1P6 747 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 ZNF839A8K0R7 811 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 DUX1O43812 170 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 IPO13O94829 963 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 WDR47O94967 919 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 NR1D1P20393 614 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 EEF1DP29692 281 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 CSF2RBP32927 897 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 CAPZBP47756 277 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLC6A12P48065 614 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 SERPINB4P48594 390 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 GFERP55789 205 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 YBX1P67809 324 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 TRIP6Q15654 476 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 THEMIS2Q5TEJ8 643 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 HHATQ5VTY9 493 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 ARMC6Q6NXE6 501 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 TRIM73Q86UV7 250 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 THOC6Q86W42 341 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 UBTD2Q8WUN7 234 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 PPM1MQ96MI6 270 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 TMEM237Q96Q45 408 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 SGPP1Q9BX95 441 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 CD244Q9BZW8 370 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 ABCG4Q9H172 646 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms