RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 RETREG3Q86VR2 466 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 PROSER1Q86XN7 944 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 SH3YL1Q96HL8 342 aaPredicted RBP11.03□□□□□ -0.64
PTCH2-203ENST00000447098 TSSK3Q96PN8 268 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 UGT2B28Q9BY64 529 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 RHBGQ9H310 441 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 MUC13Q9H3R2 512 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 MIEF1Q9NQG6 463 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 CMTM6Q9NX76 183 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 POLG2Q9UHN1 485 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 LINC01553A4QN01 128 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 WASH3PC4AMC7 463 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 OR4F21O95013 312 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 CTBSQ01459 385 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 ELP6Q0PNE2 266 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 PPP1R8Q12972 351 aaKnown RBP11.03□□□□□ -0.64
PTCH2-203ENST00000447098 EID3Q8N140 333 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 PELI3Q8N2H9 469 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 OR13F1Q8NGS4 319 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 BIRC7Q96CA5 298 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 TIFAQ96CG3 184 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 MAELQ96JY0 434 aaKnown RBP11.03□□□□□ -0.64
PTCH2-203ENST00000447098 NSMCE3Q96MG7 304 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 UHRF1Q96T88 793 aaPredicted RBP11.03□□□□□ -0.64
PTCH2-203ENST00000447098 IPPKQ9H8X2 491 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 KCTD5Q9NXV2 234 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 IL36AQ9UHA7 158 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 C3orf18Q9UK00 162 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 B3GNT3Q9Y2A9 372 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 SPO11Q9Y5K1 396 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 CABIN1Q9Y6J0 2220 aa11.03□□□□□ -0.64
PTCH2-203ENST00000447098 ISM1B1AKI9 464 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 ALOX12P18054 663 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 CAPN3P20807 821 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 HNF1BP35680 557 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 CDKN1CP49918 316 aaPredicted RBP11.02□□□□□ -0.64
PTCH2-203ENST00000447098 VAC14Q08AM6 782 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 CBLBQ13191 982 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 KCNJ8Q15842 424 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 CYBRD1Q53TN4 286 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 C9orf50Q5SZB4 431 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 CILP2Q8IUL8 1156 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 WBP2Q969T9 261 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 CWH43Q9H720 699 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 EXD2Q9NVH0 621 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 KIF17Q9P2E2 1029 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 U3KQV3 271 aa11.02□□□□□ -0.64
PTCH2-203ENST00000447098 A8MU76 341 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 C5orf58C9J3I9 102 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 NDUFB5O43674 189 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 BCAS1O75363 584 aaPredicted RBP11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SLC22A3O75751 556 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SULT1C4O75897 302 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ESR1P03372 595 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SBK3P0C264 359 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 HSD17B1P14061 328 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ETV3P41162 512 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 DEFA1P59665 94 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 DEFA3P59666 94 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 GRB7Q14451 532 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 TECRLQ5HYJ1 363 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 PSAPL1Q6NUJ1 521 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 TMPRSS11BQ86T26 416 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 PHYKPLQ8IUZ5 450 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 BEND7Q8N7W2 519 aaPredicted RBP11.02□□□□□ -0.65
PTCH2-203ENST00000447098 EEF1AKMT1Q8WVE0 214 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SMARCD2Q92925 531 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 PCDHB1Q9Y5F3 818 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SCN4AP35499 1836 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SOBPA7XYQ1 873 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 H0YAE9 185 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 TAF4O00268 1085 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 WNT9AO14904 365 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ATG13O75143 517 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 PRAMEF12O95522 483 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 PAK4O96013 591 aaPredicted RBP11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ANXA6P08133 673 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SLC6A2P23975 617 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 DNAJB1P25685 340 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ALDH3A2P51648 485 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 C11orf74Q86VG3 221 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ANKRD13BQ86YJ7 626 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SYT12Q8IV01 421 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 SPNS2Q8IVW8 549 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 MINDY1Q8N5J2 469 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 FGF13Q92913 245 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 CXorf40BQ96DE9 158 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ZHX1-C8orf76Q96EF9 292 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ALPK1Q96QP1 1244 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 FERD3LQ96RJ6 166 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 TOR3AQ9H497 397 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 RIBC2Q9H4K1 309 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 FNIP2Q9P278 1114 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 DNMT3BQ9UBC3 853 aaKnown RBP11.02□□□□□ -0.65
PTCH2-203ENST00000447098 MAGEL2Q9UJ55 1249 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ITM2BQ9Y287 266 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 TPRKBQ9Y3C4 175 aa11.02□□□□□ -0.65
PTCH2-203ENST00000447098 ZNF99A8MXY4 864 aaPredicted RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 CACNB4O00305 520 aaPredicted RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 VPS4BO75351 444 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms