RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ARF5P84085 180 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 CREMQ03060 361 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 DSC3Q14574 896 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.192e-10■■■■■ 28
ERCC3-203ENST00000445889 GPR153Q6NV75 609 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 PRSS55Q6UWB4 352 aaPredicted RBP13.87□□□□□ -0.19
ERCC3-203ENST00000445889 TTC29Q8NA56 475 aaPredicted RBP13.87□□□□□ -0.19
ERCC3-203ENST00000445889 DYNC2LI1Q8TCX1 351 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 PROX1Q92786 737 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 CCDC115Q96NT0 180 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 FAM193BQ96PV7 902 aaPredicted RBP13.87□□□□□ -0.19
ERCC3-203ENST00000445889 CLMPQ9H6B4 373 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 SERHLQ9NQF3 203 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 KIAA1522Q9P206 1035 aaPredicted RBP13.87□□□□□ -0.19
ERCC3-203ENST00000445889 PPT2Q9UMR5 302 aa13.87□□□□□ -0.19
ERCC3-203ENST00000445889 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 H3BNC9 293 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 SCELO95171 688 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 CPSF4O95639 269 aaKnown RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 CD160O95971 181 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 COL6A1P12109 1028 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 AKR1A1P14550 325 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 TNFRSF1BP20333 461 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ST13P50502 369 aaKnown RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 SLC35A2P78381 396 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ZNF177Q13360 481 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 TAF1CQ15572 869 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 CYP27C1Q4G0S4 372 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 AGAP7PQ5VUJ5 663 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 TAS1R1Q7RTX1 841 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ADAMTSL2Q86TH1 951 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 AADATQ8N5Z0 425 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 SCAIQ8N9R8 606 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 FAM83FQ8NEG4 500 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 APOLD1Q96LR9 279 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ADGRE3Q9BY15 652 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 P2RY12Q9H244 342 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 LOC100506127A0A0U1RQW1 187 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 TTC34A8MYJ7 566 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 MANBAO00462 879 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ADAM12O43184 909 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 KDELR3O43731 214 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 CLDN7O95471 211 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 VNN2O95498 520 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 IGLV3-27P01718 113 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ILF2Q12905 390 aaKnown RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 USP39Q53GS9 565 aaKnown RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 LRRC73Q5JTD7 316 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ZNF621Q6ZSS3 439 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 CARNMT1Q8N4J0 409 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 MCFD2Q8NI22 146 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 SELENOMQ8WWX9 145 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 STARD8Q92502 1023 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ZHX1-C8orf76Q96EF9 292 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 APIPQ96GX9 242 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 ZNF300Q96RE9 604 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 CD244Q9BZW8 370 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 MAGEH1Q9H213 219 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 MAGEE1Q9HCI5 957 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 SCN3BQ9NY72 215 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 IL17CQ9P0M4 197 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 SAMHD1Q9Y3Z3 626 aaKnown RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 TNPO3Q9Y5L0 923 aaKnown RBP13.86□□□□□ -0.19
ERCC3-203ENST00000445889 GREB1Q4ZG55 1949 aa13.86□□□□□ -0.19
ERCC3-203ENST00000445889 MTMR11A4FU01 709 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 PSMD11O00231 422 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 RFXANKO14593 260 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 PFDN6O15212 129 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 PCDHGA12O60330 932 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 DLGAP3O95886 979 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 IL6P05231 212 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 NUDT7P0C024 238 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 SERPINB1P30740 379 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 RYKP34925 604 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 KRT20P35900 424 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 LIPAP38571 399 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 CLK1P49759 484 aaKnown RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 CRISP3P54108 245 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 RPS14P62263 151 aaKnown RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 ZXDCQ2QGD7 858 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 PDE12Q6L8Q7 609 aaKnown RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 TMEM173Q86WV6 379 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 CLIP4Q8N3C7 705 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 POC5Q8NA72 575 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 OR52J3Q8NH60 311 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 MAL2Q969L2 176 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 BTBD2Q9BX70 525 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 FAM126AQ9BYI3 521 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 DSN1Q9H410 356 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 ACOT13Q9NPJ3 140 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 AASDHPPTQ9NRN7 309 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 KIF17Q9P2E2 1029 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 MBD1Q9UIS9 605 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 TPRKBQ9Y3C4 175 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 NAALAD2Q9Y3Q0 740 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 IFRD1O00458 451 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 SLC16A6O15403 523 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 NTRK1P04629 796 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms