RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 CCL4L1Q8NHW4 92 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 GRAMD1AQ96CP6 724 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 CXorf40BQ96DE9 158 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 PKP4Q99569 1192 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 MIPEPQ99797 713 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 TMEM79Q9BSE2 394 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 PITPNM3Q9BZ71 974 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 ALG9Q9H6U8 611 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 NKIRAS1Q9NYS0 192 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 ICKQ9UPZ9 632 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 SMIM23A6NLE4 172 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 DLX3O60479 287 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 EML2O95834 649 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
FXR1-203ENST00000445140 CD59P13987 128 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 PCSK2P16519 638 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 ITGB6P18564 788 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 RPA3P35244 121 aaPredicted RBP8.5□□□□□ -1.05
FXR1-203ENST00000445140 ARFIP1P53367 373 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
FXR1-203ENST00000445140 NHLH1Q02575 133 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 PDK4Q16654 411 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 WDR74Q6RFH5 385 aaPredicted RBP8.5□□□□□ -1.05
FXR1-203ENST00000445140 LAYNQ6UX15 382 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 PRSS42Q7Z5A4 293 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 RAB44Q7Z6P3 723 aaPredicted RBP8.5□□□□□ -1.05
FXR1-203ENST00000445140 KYQ8NBH2 561 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 CNDP1Q96KN2 507 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 NTMT1Q9BV86 223 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 CD244Q9BZW8 370 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 UCKL1Q9NWZ5 548 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 ETAA1Q9NY74 926 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 ASF1AQ9Y294 204 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 PRKAB1Q9Y478 270 aa8.5□□□□□ -1.05
FXR1-203ENST00000445140 A0A1W2PPV9 198 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 PDZK1P1A8MUH7 402 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 TAPBPO15533 448 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 TRIM13O60858 407 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SNNO75324 88 aaPredicted RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 CALRP27797 417 aaKnown RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 PBLDP30039 288 aaPredicted RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 KCNC1P48547 511 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 PKNOX1P55347 436 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SMAD1Q15797 465 aaKnown RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 ZNF678Q5SXM1 525 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SLC30A9Q6PML9 568 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 FRA10AC1Q70Z53 315 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SLC35F3Q8IY50 421 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 FBXO39Q8N4B4 442 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 LMNTD1Q8N9Z9 388 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 ABHD11Q8NFV4 315 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 OR4K1Q8NGD4 311 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 OR52E1Q8NGJ3 308 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 ZNF480Q8WV37 535 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 THAP11Q96EK4 314 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 ZNF382Q96SR6 550 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SLC32A1Q9H598 525 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 PARD6AQ9NPB6 346 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 NCDNQ9UBB6 729 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 LNPEPQ9UIQ6 1025 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 PCTPQ9UKL6 214 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 TRIOO75962 3097 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 PABPN1LA6NDY0 278 aaKnown RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 PATE3B3GLJ2 98 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 E7ENX8 843 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 K7EPI3 171 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 TK2O00142 265 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 E2F3O00716 465 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SKAP2O75563 359 aaPredicted RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 MLYCDO95822 493 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 VIPP01282 170 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SERPINE1P05121 402 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 FGF3P11487 239 aaPredicted RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 CREB1P16220 341 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 CAPZBP47756 277 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 IRX1P78414 480 aaPredicted RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 HHEXQ03014 270 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 TAP2Q03519 686 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 TRA2AQ13595 282 aaKnown RBP eCLIP8.49□□□□□ -1.053e-6■□□□□ 8.6
FXR1-203ENST00000445140 AGTRAPQ6RW13 159 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 FRMD7Q6ZUT3 714 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 ADGRF3Q8IZF5 1079 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 L3MBTL4Q8NA19 623 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 FAM46DQ8NEK8 389 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 OR5AR1Q8NGP9 310 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 NETO1Q8TDF5 533 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 CKAP2Q8WWK9 683 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 N4BP2L2Q92802 583 aaPredicted RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 MAGEB18Q96M61 343 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 EDEM2Q9BV94 578 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SLC29A3Q9BZD2 475 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 B3GNT4Q9C0J1 378 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 SLC17A7Q9P2U7 560 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 TRPS1Q9UHF7 1281 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 MOSPD1Q9UJG1 213 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 POMT2Q9UKY4 750 aa8.49□□□□□ -1.05
FXR1-203ENST00000445140 ARID1BQ8NFD5 2236 aaPredicted RBP8.49□□□□□ -1.05
FXR1-203ENST00000445140 OR5K3A6NET4 321 aa8.48□□□□□ -1.05
FXR1-203ENST00000445140 NTN3O00634 580 aaPredicted RBP8.48□□□□□ -1.05
FXR1-203ENST00000445140 TRIM38O00635 465 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms