RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TFB2MQ9H5Q4 396 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ZNF71Q9NQZ8 489 aaPredicted RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 TCAF1Q9Y4C2 921 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 RELNP78509 3460 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 SEC16AO15027 2179 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ZNF106Q9H2Y7 1883 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 PIKFYVEQ9Y2I7 2098 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 TCRBV7S3A2A0A539 114 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 C21orf140B9A014 251 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 BTN3A3O00478 584 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 BTN3A1O00481 513 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 NPY2RP49146 381 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 HSPA14Q0VDF9 509 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 PDIA2Q13087 525 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 AARS2Q5JTZ9 985 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 CASC4Q6P4E1 433 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ATG14Q6ZNE5 492 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ATCAYQ86WG3 371 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ANKRD42Q8N9B4 389 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 OR5AR1Q8NGP9 310 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 OR8K5Q8NH50 307 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 GSDMBQ8TAX9 411 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 AENQ8WTP8 325 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 MR1Q95460 341 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 CAVIN3Q969G5 261 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 RANBP9Q96S59 729 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 SAYSD1Q9NPB0 183 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 CHRAC1Q9NRG0 131 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 SPTBP11277 2137 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 LRRK2Q5S007 2527 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CDC14CA4D256 554 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 SDR42E2A6NKP2 422 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 TMEM150CB9EJG8 249 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 DYNC1I1O14576 645 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CREG1O75629 220 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CYP2A7P20853 494 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 SHMT2P34897 504 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CRADDP78560 199 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 DHX9Q08211 1270 aaKnown RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 PCID2Q5JVF3 399 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 TBC1D21Q8IYX1 336 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 GPR135Q8IZ08 494 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ZBED8Q8IZ13 594 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 C9orf43Q8TAL5 461 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CT55Q8WUE5 264 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ASZ1Q8WWH4 475 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 PEX13Q92968 403 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ZNF501Q96CX3 271 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 NRTNQ99748 197 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 TRIM4Q9C037 500 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ACTL8Q9H568 366 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 SYTL2Q9HCH5 934 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CATSPERZQ9NTU4 200 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 TUBD1Q9UJT1 453 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 SERTAD3Q9UJW9 196 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 POLHQ9Y253 713 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 BTRCQ9Y297 605 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 MAD1L1Q9Y6D9 718 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 E7ESA3 106 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 TP73O15350 636 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 MYBL2P10244 700 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 PVRP15151 417 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ST6GAL1P15907 406 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 PHBP35232 272 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 MAGEA3P43357 314 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 TTPAP49638 278 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ZNF658BQ4V348 819 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 PTRHD1Q6GMV3 140 aaKnown RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ZNF534Q76KX8 674 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 TRMT10CQ7L0Y3 403 aaKnown RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 LDB1Q86U70 411 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CAND1Q86VP6 1230 aaKnown RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 OR5K2Q8NHB8 316 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 CFAP61Q8NHU2 1237 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 PYROXD1Q8WU10 500 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 SKA2Q8WVK7 121 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ABHD17AQ96GS6 310 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 GPR87Q9BY21 358 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 AKIRIN1Q9H9L7 192 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-203ENST00000443016 IRAK4Q9NWZ3 460 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 ACTR10Q9NZ32 417 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 RIMKLBQ9ULI2 386 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 MAN2B2Q9Y2E5 1009 aa8.47□□□□□ -1.05
USP6NL-203ENST00000443016 MAGEB16A2A368 324 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 ISM1B1AKI9 464 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 MKRN2OSH3BPM6 223 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 PRMT5O14744 637 aaPredicted RBP8.46□□□□□ -1.05
USP6NL-203ENST00000443016 RPN2P04844 631 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 APOA4P06727 396 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 PSMA3P25788 255 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 MGAT1P26572 445 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 MAGEA4P43358 317 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 PMS2P54278 862 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 PRAMEF17Q5VTA0 474 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 SPESP1Q6UW49 350 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 UNC5AQ6ZN44 842 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 RELL1Q8IUW5 271 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 ADGRF3Q8IZF5 1079 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 OR6C2Q9NZP2 312 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 PLAGL1Q9UM63 463 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms