RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 GSDMCQ9BYG8 508 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 YTHDF1Q9BYJ9 559 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 RAB34Q9BZG1 259 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TPSD1Q9BZJ3 242 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SOX17Q9H6I2 414 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 CATSPERBQ9H7T0 1116 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF334Q9HCZ1 680 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 SSU72Q9NP77 194 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 GSN-AS1Q9NRJ2 163 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MCUBQ9NWR8 336 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SCN3BQ9NY72 215 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 USE1Q9NZ43 259 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CNTN3Q9P232 1028 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MKLN1Q9UL63 735 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SCML1Q9UN30 329 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC6A14Q9UN76 642 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SSR3Q9UNL2 185 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 COG5Q9UP83 839 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 POFUT2Q9Y2G5 429 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DLGAP4Q9Y2H0 992 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PLLPQ9Y342 182 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TCAF1Q9Y4C2 921 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF451Q9Y4E5 1061 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HES2Q9Y543 173 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 INSL6Q9Y581 213 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PEX16Q9Y5Y5 336 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ALG5Q9Y673 324 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PRRC2CQ9Y520 2896 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 SPEGQ15772 3267 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FRYLO94915 3013 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HIVEP3Q5T1R4 2406 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PRSS51A0A1B0GVH4 220 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 LINC01553A4QN01 128 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TMEM150BA6NC51 233 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC38A8A6NNN8 435 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 A8MVJ9 347 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 EFCAB9A8MZ26 197 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 KRBOX1C9JBD0 128 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 E9PAM4 449 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 G3V2T6 193 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 H0YCG3 227 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PSMD9O00233 223 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SOCS2O14508 198 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PRRG1O14668 218 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TCAPO15273 167 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 B4GAT1O43505 415 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 UGT2B11O75310 529 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CIAO1O76071 339 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ATG12O94817 140 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PGLSO95336 258 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FTLP02792 175 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 RLN2P04090 185 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PRB1P04280 392 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 S100A8P05109 93 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ANXA6P08133 673 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CYBAP13498 195 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NPR2P20594 1047 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 AVPR2P30518 371 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC1A6P48664 564 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ALDH9A1P49189 494 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GZMKP49863 264 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NOVA1P51513 510 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 WDR5P61964 334 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 SCN1BQ07699 218 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GALNT2Q10471 571 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 EPS8Q12929 822 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MADCAM1Q13477 382 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FBXO48Q5FWF7 155 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CATSPEREQ5SY80 951 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NXNL2Q5VZ03 156 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 OR7E24Q6IFN5 339 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 LINC00299Q6ZSB3 139 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SSX6Q7RTT6 188 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DNAJB7Q7Z6W7 309 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 CIR1Q86X95 450 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 UBR7Q8N806 425 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF557Q8N988 423 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 BANPQ8N9N5 519 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 IL17RCQ8NAC3 791 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 OR52K2Q8NGK3 314 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ETNPPLQ8TBG4 499 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TRMT10AQ8TBZ6 339 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF564Q8TBZ8 553 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC13A3Q8WWT9 602 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PIGKQ92643 395 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PGAP3Q96FM1 320 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 GMCL1Q96IK5 515 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 C10orf90Q96M02 699 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PIGSQ96S52 555 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 VAT1Q99536 393 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RIT2Q99578 217 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NPAS1Q99742 590 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 APOL2Q9BQE5 337 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TCEAL7Q9BRU2 100 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC22A4Q9H015 551 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PCDHAC1Q9H158 963 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 C2orf40Q9H1Z8 148 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MMP28Q9H239 520 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MMP27Q9H306 513 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ALG2Q9H553 416 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms