RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 OSBPL11Q9BXB4 747 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SPRY4Q9C004 299 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 MUC3BQ9H195 1237 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TPK1Q9H3S4 243 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 AGPAT4Q9NRZ5 378 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 PNPLA3Q9NST1 481 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 QPCTLQ9NXS2 382 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TMEM9Q9P0T7 183 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 RIMS3Q9UJD0 308 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ERVK-11Q9UQG0 969 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 OSGIN2Q9Y236 505 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 MYRFQ9Y2G1 1151 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 AP4S1Q9Y587 144 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 COPG1Q9Y678 874 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ANKRD36A6QL64 1941 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 MN1Q10571 1320 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 A0A1B0GUH1 482 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 PRSS51A0A1B0GVH4 220 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 A8MU76 341 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 KCNU1A8MYU2 1149 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 CENPBD1B2RD01 187 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 TMEM114B3SHH9 223 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 FAM47E-STBD1D6RA91 191 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 E5RJQ4 531 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 COPEO14579 308 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 GRID2O43424 1007 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 KDM1AO60341 852 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 SNAP91O60641 907 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 CLDN11O75508 207 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ENDOD1O94919 500 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ZBTB11O95625 1053 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 MT-CO1P00395 513 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 BPGMP07738 259 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 SNRPAP09012 282 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ALOX5P09917 674 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 CCNYL3P0C7X3 344 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 SLC2A3P11169 496 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ITGAXP20702 1163 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 CD1CP29017 333 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 GPR3P46089 330 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 GSSP48637 474 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 EIF2B2P49770 351 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 MXI1P50539 228 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ARSEP51690 589 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ALDH18A1P54886 795 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 YWHAEP62258 255 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 TMPRSS15P98073 1019 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 GPS1Q13098 491 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 EIF4EBP2Q13542 120 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 DNASE1L3Q13609 305 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 FASTKD3Q14CZ7 662 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 OASLQ15646 514 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 HIF1AQ16665 826 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 PHKG1Q16816 387 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 RGS21Q2M5E4 152 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 RALGPS1Q5JS13 557 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 LRRC38Q5VT99 294 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 NKAIN2Q5VXU1 208 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 METTL21CQ5VZV1 264 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 NANOGP8Q6NSW7 305 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 FBXL22Q6P050 247 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 TMEM71Q6P5X7 295 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 TIFABQ6ZNK6 161 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 DPY19L3Q6ZPD9 716 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 LINC00299Q6ZSB3 139 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 PARS2Q7L3T8 475 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 AMIGO2Q86SJ2 522 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 FJX1Q86VR8 437 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 CARM1Q86X55 608 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ZNF677Q86XU0 584 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ZNF354CQ86Y25 554 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 LRRC49Q8IUZ0 686 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 NUDCD3Q8IVD9 361 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ARHGEF19Q8IW93 802 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 WDR75Q8IWA0 830 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 SFTPA2Q8IWL1 248 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 PALM2Q8IXS6 379 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 MCOLN2Q8IZK6 566 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 PPM1KQ8N3J5 372 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 POU5F2Q8N7G0 328 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 RBMXL3Q8N7X1 1067 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 UBR7Q8N806 425 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 BMPERQ8N8U9 685 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 NAT8LQ8N9F0 302 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 DCAF4L2Q8NA75 395 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ST6GALNAC3Q8NDV1 305 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 FBXL13Q8NEE6 735 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 SPATA3Q8NHX4 192 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 CHTF18Q8WVB6 975 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 STON2Q8WXE9 905 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 THAP4Q8WY91 577 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 FAM149B1Q96BN6 582 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 THAP11Q96EK4 314 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 ZNF597Q96LX8 424 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 CNBD2Q96M20 576 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 WDR92Q96MX6 357 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 RILPQ96NA2 401 aa6.31□□□□□ -1.4
HDAC6-210ENST00000441703 RPRD1AQ96P16 312 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
HDAC6-210ENST00000441703 YTHDF1Q9BYJ9 559 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms