RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 C21orf33P30042 268 aaPredicted RBP16.41■□□□□ 0.22
PMS1-213ENST00000441310 DGKQP52824 942 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 HSPA14Q0VDF9 509 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 IL18R1Q13478 541 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 TP53BP2Q13625 1128 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 TIGD6Q17RP2 521 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 AAK1Q2M2I8 961 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 ESCO2Q56NI9 601 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 MRPL10Q7Z7H8 261 aaKnown RBP16.41■□□□□ 0.22
PMS1-213ENST00000441310 RTN4RL1Q86UN2 441 aaPredicted RBP16.41■□□□□ 0.22
PMS1-213ENST00000441310 OR2T12Q8NG77 320 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 OR10A6Q8NH74 314 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 GIPC2Q8TF65 315 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 FBLIM1Q8WUP2 373 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.41■□□□□ 0.22
PMS1-213ENST00000441310 SHOXO15266 292 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 RGS5O15539 181 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 GPR15P49685 360 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 AP2S1P53680 142 aaPredicted RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 SLC39A12Q504Y0 691 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 RAB41Q5JT25 222 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 UBE2J2Q8N2K1 259 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 ISG20Q96AZ6 181 aaKnown RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 TMCO6Q96DC7 493 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 TBL1YQ9BQ87 522 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 THUMPD3Q9BV44 507 aaKnown RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 MRPL9Q9BYD2 267 aaKnown RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 RWDD3Q9Y3V2 267 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 H3BUI4 141 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 CCL22O00626 93 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 MSH3P20585 1137 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 PPP3CCP48454 512 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 TAGLNQ01995 201 aaKnown RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 GTF2H3Q13889 308 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 EFR3AQ14156 821 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 DDR2Q16832 855 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 ZMAT1Q5H9K5 638 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 NOMO2Q5JPE7 1267 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 PDZD4Q76G19 769 aaPredicted RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 TEKT5Q96M29 485 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 ACBD6Q9BR61 282 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 LEUTXA8MZ59 168 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 E5RI56 91 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 ZNF623O75123 536 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 PMPCBO75439 489 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 CYP2A6P11509 494 aaPredicted RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 TM4SF4P48230 202 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 CDKN2DP55273 166 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 SPATA2LQ8IUW3 424 aaPredicted RBP16.4■□□□□ 0.22
PMS1-213ENST00000441310 CACTIN-AS1Q8N1I8 211 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 DCBLD1Q8N8Z6 715 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 KBTBD8Q8NFY9 601 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 OR4M1Q8NGD0 313 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 ZNF583Q96ND8 569 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 VNN3Q9NY84 501 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 HCSTQ9UBK5 93 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 TMPRSS11EQ9UL52 423 aa16.4■□□□□ 0.22
PMS1-213ENST00000441310 A8MUA0 341 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 ARHGEF15O94989 841 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 SNX4O95219 450 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 FGF4P08620 206 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 PRKACAP17612 351 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 DSC3Q14574 896 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 BTBD16Q32M84 506 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 DLEU7Q6UYE1 221 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 RAB44Q7Z6P3 723 aaPredicted RBP16.39■□□□□ 0.21
PMS1-213ENST00000441310 PDLIM5Q96HC4 596 aaKnown RBP16.39■□□□□ 0.21
PMS1-213ENST00000441310 APOL4Q9BPW4 351 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 SLC30A2Q9BRI3 323 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 AIFM2Q9BRQ8 373 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 NXF2Q9GZY0 626 aaKnown RBP16.39■□□□□ 0.21
PMS1-213ENST00000441310 TRHDEQ9UKU6 1024 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 FADS2P1A8MWK0 482 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 MYO1GB0I1T2 1018 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 DFNA5O60443 496 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 TSC22D2O75157 780 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 CSF2P04141 144 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 RPLP0P05388 317 aaKnown RBP16.39■□□□□ 0.21
PMS1-213ENST00000441310 HSMCR30P0CW71 290 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 GRK4P32298 578 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 ACLYP53396 1101 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 CYP4F2P78329 520 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 CYP4F3Q08477 520 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 FAPQ12884 760 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 MBTPS1Q14703 1052 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 FNDC5Q8NAU1 212 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 TSPEARQ8WU66 669 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 CCNB1IP1Q9NPC3 277 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 MUTYHQ9UIF7 546 aa16.39■□□□□ 0.21
PMS1-213ENST00000441310 OR7A10O76100 309 aa16.38■□□□□ 0.21
PMS1-213ENST00000441310 CCNYL3P0C7X3 344 aa16.38■□□□□ 0.21
PMS1-213ENST00000441310 PRDX3P30048 256 aaKnown RBP16.38■□□□□ 0.21
PMS1-213ENST00000441310 PBX3P40426 434 aa16.38■□□□□ 0.21
PMS1-213ENST00000441310 RFX4Q33E94 735 aa16.38■□□□□ 0.21
PMS1-213ENST00000441310 FAM171BQ6P995 826 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms