RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CST5P28325 142 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 CD70P32970 193 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 GNALP38405 381 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 SCTRP47872 440 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 ARFIP1P53367 373 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 FOXK1P85037 733 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 DSC1Q08554 894 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 NEDD8Q15843 81 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 ATG14Q6ZNE5 492 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 TMEFF1Q8IYR6 380 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 GHDCQ8N2G8 530 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 BPIFB6Q8NFQ5 453 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 IGSF8Q969P0 613 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 KCTD3Q9Y597 815 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 TP53I11O14683 189 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 IFNW1P05000 195 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 ACADSP16219 412 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 OR4D2P58180 307 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 PRKD1Q15139 912 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 EFHD2Q96C19 240 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 CHMP1AQ9HD42 196 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 MKKSQ9NPJ1 570 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 RAPGEFL1Q9UHV5 662 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 SPIN1Q9Y657 262 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 BTN3A3O00478 584 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 METTL18O95568 372 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 ITGBL1O95965 494 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 TAS2R39P59534 338 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 ZNF267Q14586 743 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 SLC35G1Q2M3R5 365 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 TAS1R1Q7RTX1 841 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 THAP5Q7Z6K1 395 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 C1orf74Q96LT6 269 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 COL2A1P02458 1487 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 TRIM38O00635 465 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 CDH1P12830 882 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 CCNOP22674 350 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 PTX3P26022 381 aaPredicted RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 RCVRNP35243 200 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 AP1S2P56377 157 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 RING1Q06587 406 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 FAM182AQ5T1J6 154 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 RINLQ6ZS11 566 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 TTC9BQ8N6N2 239 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 NIPA2Q8N8Q9 360 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 PHOSPHO1Q8TCT1 267 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 CLCC1Q96S66 551 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 COQ7Q99807 217 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 MRPS7Q9Y2R9 242 aaKnown RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 HIDE1A8MVS5 230 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 C9JVG2 144 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 SERPINB1P30740 379 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 HOXA11P31270 313 aaPredicted RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 TNFRSF4P43489 277 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 YAP1P46937 504 aaKnown RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 NRF1Q16656 503 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 SMARCD3Q6STE5 483 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 TRAM1L1Q8N609 369 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 C11orf65Q8NCR3 313 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 SETD6Q8TBK2 473 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 RASSF5Q8WWW0 418 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 NSMCE3Q96MG7 304 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 NPY6RQ99463 290 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 DUSP26Q9BV47 211 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 ERGIC3Q9Y282 383 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 U3KQV3 271 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 LILRB3O75022 631 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 MYL9P24844 172 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 CAPZA1P52907 286 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 RPS14P62263 151 aaKnown RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 HSF2Q03933 536 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 CCNIQ14094 377 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 DGCR6Q14129 220 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 DCST1Q5T197 706 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 NIPAL1Q6NVV3 410 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 LRRC70Q7Z2Q7 622 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 TSPAN14Q8NG11 270 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 OR52J3Q8NH60 311 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 GLYATL1Q969I3 302 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 MRPL38Q96DV4 380 aaKnown RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 MAP3K3Q99759 626 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 TDRD1Q9BXT4 1180 aaKnown RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 TFB2MQ9H5Q4 396 aaKnown RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 USP29Q9HBJ7 922 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 SIX2Q9NPC8 291 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 DYTNA2CJ06 578 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 PIP5K1BO14986 540 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 RRP8O43159 456 aaKnown RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 ASNA1O43681 348 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 PCYT1AP49585 367 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 CRISP3P54108 245 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 FASTKD3Q14CZ7 662 aaKnown RBP11.8□□□□□ -0.52
NEK1-201ENST00000439128 SNAPC1Q16533 368 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 RNF43Q68DV7 783 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 ANKRD54Q6NXT1 300 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 NCEH1Q6PIU2 408 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 PIH1D2Q8WWB5 315 aa11.8□□□□□ -0.52
NEK1-201ENST00000439128 SLC2A6Q9UGQ3 507 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms