RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZBTB11O95625 1053 aaPredicted RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 GGT5P36269 586 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 RELAQ04206 551 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 PDGFRLQ15198 375 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 ZBED5Q49AG3 693 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 ATP13A5Q4VNC0 1218 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 TMEM184AQ6ZMB5 413 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 CROCCP3Q8IVE0 287 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 TBC1D15Q8TC07 691 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 SKA2Q8WVK7 121 aaPredicted RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 GFM2Q969S9 779 aaKnown RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 MTFMTQ96DP5 389 aaKnown RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 CD244Q9BZW8 370 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 MBD1Q9UIS9 605 aaPredicted RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 KRT87PA6NCN2 255 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 PORP16435 677 aaPredicted RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 GPR33Q49SQ1 333 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 FNDC3BQ53EP0 1204 aaKnown RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 C1QTNF12Q5T7M4 302 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 DLEU7Q6UYE1 221 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 PTRH1Q86Y79 214 aaKnown RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 HM13Q8TCT9 377 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 TIFAQ96CG3 184 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 PCDH12Q9NPG4 1184 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 MUC22E2RYF6 1773 aaPredicted RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 TCRBV5S2A0A599 114 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 UPK3BL1B0FP48 263 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 LOC730098B7Z3J9 87 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 UPK3BL2E5RIL1 263 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 K7EPI3 171 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 ANKRD28O15084 1053 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 ENO2P09104 434 aaPredicted RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 HLA-EP13747 358 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 ZNF182P17025 639 aaPredicted RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 HRH2P25021 359 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 SPINT3P49223 89 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 PTPN5P54829 565 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 ESRRGP62508 458 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 B4GALNT1Q00973 533 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 RAB39AQ14964 217 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 CRY1Q16526 586 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 ZNF805Q5CZA5 627 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 LYPLAL1Q5VWZ2 237 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 DNAJC14Q6Y2X3 702 aaPredicted RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 HID1Q8IV36 788 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 TRPV3Q8NET8 790 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 CLHC1Q8NHS4 586 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 CYGBQ8WWM9 190 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 PPP1R14BQ96C90 147 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 MYADMQ96S97 322 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 ADI1Q9BV57 179 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 PLA2G2FQ9BZM2 168 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 PAIP2BQ9ULR5 123 aaKnown RBP13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 CCL27Q9Y4X3 112 aa13.53□□□□□ -0.24
PTCHD3-201ENST00000438700 A0A087WXM4 84 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 TSPAN11A1L157 253 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 FUOMA2VDF0 154 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 B4GAT1O43505 415 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 ADAM23O75077 832 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 GPIP06744 558 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 CYP2A6P11509 494 aaPredicted RBP13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 TIMP2P16035 220 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 VIPR1P32241 457 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 CCT8P50990 548 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 EEFSECP57772 596 aaKnown RBP13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 HSPA14Q0VDF9 509 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 PLCL1Q15111 1095 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 NEDD8Q15843 81 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 IRAK1BP1Q5VVH5 260 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 SULT1C3Q6IMI6 304 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 DCDC5Q6ZRR9 648 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 PLEKHA8Q96JA3 519 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 KXD1Q9BQD3 176 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 ANAPC2Q9UJX6 822 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 ZNF490Q9ULM2 529 aaPredicted RBP13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 XIRP2A4UGR9 3374 aa13.52□□□□□ -0.24
PTCHD3-201ENST00000438700 AGAP14A8MT82 685 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 EI24O14681 340 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 ULK1O75385 1050 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 MTX2O75431 263 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 SERPINB7O75635 380 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 EPB42P16452 691 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 CCR7P32248 378 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 NSG1P42857 185 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 FCHO2Q0JRZ9 810 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 MERTKQ12866 999 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 CPSF6Q16630 551 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 IMPG1Q17R60 797 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 FAM174BQ3ZCQ3 159 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 PYCR3Q53H96 274 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 HSD11B1LQ7Z5J1 315 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 KRTCAP2Q8N6L1 136 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms