RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 C4orf22Q6V702 233 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 CATSPER1Q8NEC5 780 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 OR1N1Q8NGS0 311 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 TFB1MQ8WVM0 346 aaKnown RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 NACC2Q96BF6 587 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 DCUN1D1Q96GG9 259 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 THOC3Q96J01 351 aaKnown RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 LINC00615Q96LM1 132 aaPredicted RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 HGH1Q9BTY7 390 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 TFB2MQ9H5Q4 396 aaKnown RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 FAM153AQ9UHL3 310 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 SH3BGRL2Q9UJC5 107 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 LOC285095A0A1B0GVY8 99 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 H3BMH7 237 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 SOCS6O14544 535 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 STX7O15400 261 aaKnown RBP13.53□□□□□ -0.24
LINC01088-201ENST00000437737 CTSBP07858 339 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 RALBP11234 206 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 PECAM1P16284 738 aaPredicted RBP13.53□□□□□ -0.24
LINC01088-201ENST00000437737 ALAS2P22557 587 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 TDGF1P3P51864 188 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 WNT3AP56704 352 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 ARG2P78540 354 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 PRKG2Q13237 762 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 MFAP5Q13361 173 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 TUBB8Q3ZCM7 444 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 TEX44Q53QW1 395 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 NPNTQ6UXI9 565 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 RPTNQ6XPR3 784 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 ADGRF3Q8IZF5 1079 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 CCDC89Q8N998 374 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 PHC3Q8NDX5 983 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 NR4A3Q92570 626 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 LRRC1Q9BTT6 524 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 ASB8Q9H765 288 aa13.53□□□□□ -0.24
LINC01088-201ENST00000437737 R3HDM2Q9Y2K5 976 aaKnown RBP13.53□□□□□ -0.24
LINC01088-201ENST00000437737 CTIFO43310 598 aaKnown RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 UGT2B7P16662 529 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 SSTR2P30874 369 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 GABRA4P48169 554 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 PRLHRP49683 370 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 TMPRSS15P98073 1019 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 PTPRCAPQ14761 206 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 PPP1R7Q15435 360 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 TESK1Q15569 626 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 ZIC1Q15915 447 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 RBBP7Q16576 425 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 ZNF324BQ6AW86 544 aaPredicted RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 TMEM207Q6UWW9 146 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 SPNS3Q6ZMD2 512 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 ZNF295-AS1Q8N0V1 137 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 NOA1Q8NC60 698 aaKnown RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 ATG4AQ8WYN0 398 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 POM121Q96HA1 1249 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 TEKT5Q96M29 485 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 OLFM3Q96PB7 478 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 TRIM56Q9BRZ2 755 aaKnown RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 MVB12BQ9H7P6 319 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 COG4Q9H9E3 785 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 MRM3Q9HC36 420 aaKnown RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 SLC22A11Q9NSA0 550 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 SAE1Q9UBE0 346 aaPredicted RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 CRLS1Q9UJA2 301 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 HS3ST3B1Q9Y662 390 aa13.52□□□□□ -0.25
LINC01088-201ENST00000437737 SNRNP200O75643 2136 aaKnown RBP13.52□□□□□ -0.25
LINC01088-201ENST00000437737 RAD51CO43502 376 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 SGTAO43765 313 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 SRP72O76094 671 aaKnown RBP13.51□□□□□ -0.25
LINC01088-201ENST00000437737 KLHL18O94889 574 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 UNC5CO95185 931 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 EPOP01588 193 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 PIM1P11309 404 aaPredicted RBP13.51□□□□□ -0.25
LINC01088-201ENST00000437737 NFKB1P19838 968 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 PTPN3P26045 913 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 KCNJ1P48048 391 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 SLC1A5Q15758 541 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 ZNF449Q6P9G9 518 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 KDELC1Q6UW63 502 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 KIRREL2Q6UWL6 708 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 SHISA6Q6ZSJ9 500 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 TTLL10Q6ZVT0 673 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 CDH24Q86UP0 819 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 IFT20Q8IY31 132 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 BBOF1Q8ND07 529 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 IPMKQ8NFU5 416 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 DLG3Q92796 817 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 FKBP10Q96AY3 582 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 QKIQ96PU8 341 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC01088-201ENST00000437737 TAAR6Q96RI8 345 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 LMF1Q96S06 567 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 VAT1Q99536 393 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 OR52A5Q9H2C5 316 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 SOX17Q9H6I2 414 aaPredicted RBP13.51□□□□□ -0.25
LINC01088-201ENST00000437737 PLCL2Q9UPR0 1127 aa13.51□□□□□ -0.25
LINC01088-201ENST00000437737 ICKQ9UPZ9 632 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms