RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FZD1Q9UP38 647 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 FAM237BA0A1B0GVD1 139 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 OTOL1A6NHN0 477 aaPredicted RBP10.97□□□□□ -0.65
SCN4A-201ENST00000435607 BTBD19C9JJ37 291 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SASH3O75995 380 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 RAB36O95755 333 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 TNFSF9P41273 254 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SLC15A1P46059 708 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 MMAAQ8IVH4 418 aaKnown RBP10.97□□□□□ -0.65
SCN4A-201ENST00000435607 KLHL36Q8N4N3 616 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 OR5M3Q8NGP4 307 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 hCG_1818297A0A087WSY0 165 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 BMP4P12644 408 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 POU5F1Q01860 360 aaKnown RBP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 ZFP69Q49AA0 526 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 ESCO2Q56NI9 601 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF782Q6ZMW2 699 aaPredicted RBP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 SMARCD2Q92925 531 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 TRPV4Q9HBA0 871 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 ACRP10323 421 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 TPSB2P20231 275 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 S100A7P31151 101 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 RAB28P51157 221 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 SLC25A3Q00325 362 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 PLGLAQ15195 96 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 SEC23BQ15437 767 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 TPSAB1Q15661 275 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 MTFR2Q6P444 385 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 SLCO6A1Q86UG4 719 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 TRMT10AQ8TBZ6 339 aaKnown RBP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 CMTM7Q96FZ5 175 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 ZC3H10Q96K80 434 aaKnown RBP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 WDR77Q9BQA1 342 aaPredicted RBP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 C11orf16Q9NQ32 467 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 FCF1Q9Y324 198 aaKnown RBP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 FRMPD1Q5SYB0 1578 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 CDC7O00311 574 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 MPPED1O15442 326 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 LCP2Q13094 533 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 GPR68Q15743 365 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 PDE12Q6L8Q7 609 aaKnown RBP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 YIPF7Q8N8F6 280 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 OR52J3Q8NH60 311 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 FUBP3Q96I24 572 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCN4A-201ENST00000435607 FAM83CQ9BQN1 747 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 EHD1Q9H4M9 534 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 ACTL8Q9H568 366 aa10.96□□□□□ -0.65
SCN4A-201ENST00000435607 GNB5O14775 395 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 PSMD10O75832 226 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 ATG12O94817 140 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 CCNE2O96020 404 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 TAL1P17542 331 aaPredicted RBP10.96□□□□□ -0.66
SCN4A-201ENST00000435607 CLCNKBP51801 687 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 TARDBPQ13148 414 aaKnown RBP eCLIP10.96□□□□□ -0.66
SCN4A-201ENST00000435607 TMEM225Q6GV28 225 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 SLC2A7Q6PXP3 512 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 C22orf15Q8WYQ4 148 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 GCDHQ92947 438 aaPredicted RBP10.96□□□□□ -0.66
SCN4A-201ENST00000435607 SMIM28A0A1B0GU29 152 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 HHLA1C9JL84 531 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 MATN3O15232 486 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 OXTRP30559 389 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 OR12D2P58182 307 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 SPIN4Q56A73 249 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 PRAMEF14Q5SWL7 426 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 PRAMEF13Q5VWM6 474 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 TMCO2Q7Z6W1 182 aaPredicted RBP10.96□□□□□ -0.66
SCN4A-201ENST00000435607 OR7D4Q8NG98 312 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 EFCAB11Q9BUY7 163 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 CADM1Q9BY67 442 aaKnown RBP10.96□□□□□ -0.66
SCN4A-201ENST00000435607 BRD7Q9NPI1 651 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 GPRC5BQ9NZH0 403 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 TMA7Q9Y2S6 64 aaKnown RBP10.96□□□□□ -0.66
SCN4A-201ENST00000435607 DIP2AQ14689 1571 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 CBSLP0DN79 551 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 JUPP14923 745 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 MSX1P28360 303 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 CBSP35520 551 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 UBE2NP61088 152 aaKnown RBP10.96□□□□□ -0.66
SCN4A-201ENST00000435607 GPR33Q49SQ1 333 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 PTPN20Q4JDL3 420 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 SPRYD7Q5W111 196 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 LCLAT1Q6UWP7 414 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 FAM110BQ8TC76 370 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 DLC1Q96QB1 1528 aa10.96□□□□□ -0.66
SCN4A-201ENST00000435607 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 SH3PXD2BA1X283 911 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 SH3D21A4FU49 640 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ENPP3O14638 875 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ABCB7O75027 752 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CHRNA1P02708 482 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CYP11A1P05108 521 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 GSTT2P0CG29 244 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 NT5DC1Q5TFE4 455 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 LRRC66Q68CR7 880 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 OR52E4Q8NGH9 312 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 OR2T34Q8NGX1 318 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 OR2T3Q8NH03 318 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms