RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 HSD17B2P37059 387 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 ARL4DP49703 201 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 POU4F1Q01851 419 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 TLE3Q04726 772 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 SP140Q13342 867 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 TUBB3Q13509 450 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 ZIC1Q15915 447 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 TMTC4Q5T4D3 741 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 LRRC69Q6ZNQ3 347 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 UBE2R2Q712K3 238 aaPredicted RBP17.72■□□□□ 0.43
HLA-F-220ENST00000434407 IFT20Q8IY31 132 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 C19orf47Q8N9M1 422 aaKnown RBP17.72■□□□□ 0.43
HLA-F-220ENST00000434407 OR8K5Q8NH50 307 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 ZNF501Q96CX3 271 aaPredicted RBP17.72■□□□□ 0.43
HLA-F-220ENST00000434407 LINGO1Q96FE5 620 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 GPR22Q99680 433 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 POPDC3Q9HBV1 291 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 PDE7BQ9NP56 450 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 FGF21Q9NSA1 209 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 MTO1Q9Y2Z2 717 aaKnown RBP17.72■□□□□ 0.43
HLA-F-220ENST00000434407 KLK4Q9Y5K2 254 aa17.72■□□□□ 0.43
HLA-F-220ENST00000434407 FER1L5A0AVI2 2057 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 SLC16A8O95907 504 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 ITPKBP27987 946 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 OAS2P29728 719 aaKnown RBP17.71■□□□□ 0.43
HLA-F-220ENST00000434407 GABRA4P48169 554 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 FASTKQ14296 549 aaKnown RBP17.71■□□□□ 0.43
HLA-F-220ENST00000434407 UBAP2Q5T6F2 1119 aaKnown RBP17.71■□□□□ 0.43
HLA-F-220ENST00000434407 GRTP1Q5TC63 336 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 PPP1R3BQ86XI6 285 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 CEP97Q8IW35 865 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 LRRC56Q8IYG6 542 aaPredicted RBP17.71■□□□□ 0.43
HLA-F-220ENST00000434407 MYO1HQ8N1T3 1032 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 C2orf73Q8N5S3 287 aaPredicted RBP17.71■□□□□ 0.43
HLA-F-220ENST00000434407 SMPDL3AQ92484 453 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 ANKRD7Q92527 254 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 TCTN2Q96GX1 697 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 NAF1Q96HR8 494 aaKnown RBP17.71■□□□□ 0.43
HLA-F-220ENST00000434407 CDC42EP4Q9H3Q1 356 aaKnown RBP17.71■□□□□ 0.43
HLA-F-220ENST00000434407 PARVBQ9HBI1 364 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 SOHLH2Q9NX45 425 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 TXNDC16Q9P2K2 825 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 ADAMTS6Q9UKP5 1117 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 RARRES3Q9UL19 164 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 PDE10AQ9Y233 779 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 ZFYVE26Q68DK2 2539 aa17.71■□□□□ 0.43
HLA-F-220ENST00000434407 CACNA1GO43497 2377 aa17.71■□□□□ 0.42
HLA-F-220ENST00000434407 CHD6Q8TD26 2715 aa17.71■□□□□ 0.42
HLA-F-220ENST00000434407 RHOXF2BP0C7M4 288 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 MAP4P27816 1152 aaKnown RBP17.7■□□□□ 0.42
HLA-F-220ENST00000434407 SPRP35270 261 aaPredicted RBP17.7■□□□□ 0.42
HLA-F-220ENST00000434407 PNLIPRP1P54315 467 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 MAP7Q14244 749 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 TGIF1Q15583 401 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 GPR19Q15760 415 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 CDHR3Q6ZTQ4 885 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 CTAGE3PQ8IX95 158 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 NKAPQ8N5F7 415 aaKnown RBP17.7■□□□□ 0.42
HLA-F-220ENST00000434407 PPM1NQ8N819 430 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 OR2A1Q8NGT9 310 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 MCOLN3Q8TDD5 553 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 ZNF480Q8WV37 535 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 RHOXF2Q9BQY4 288 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 KLHL25Q9H0H3 589 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 ACSS3Q9H6R3 686 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 FAM60AQ9NP50 221 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 NFU1Q9UMS0 254 aa17.7■□□□□ 0.42
HLA-F-220ENST00000434407 ZNF839A8K0R7 811 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 E7ENX8 843 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 H3BMH7 237 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 KLK10O43240 276 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 FAM155BO75949 473 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 STK17BO94768 372 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 TIAF1O95411 115 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 ZNF28P17035 718 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 CYP2A7P20853 494 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 IMPA1P29218 277 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 PHBP35232 272 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 TAP2Q03519 686 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 EFTUD2Q15029 972 aaKnown RBP eCLIP17.69■□□□□ 0.42
HLA-F-220ENST00000434407 ZKSCAN8Q15776 578 aaPredicted RBP17.69■□□□□ 0.42
HLA-F-220ENST00000434407 KIAA1614Q5VZ46 1190 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 PWWP2BQ6NUJ5 590 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 TIPARPQ7Z3E1 657 aaKnown RBP17.69■□□□□ 0.42
HLA-F-220ENST00000434407 TAX1BP1Q86VP1 789 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 FAM20CQ8IXL6 584 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 DNAJC22Q8N4W6 341 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 EIF1ADQ8N9N8 165 aaKnown RBP17.69■□□□□ 0.42
HLA-F-220ENST00000434407 NKD1Q969G9 470 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 ZUFSPQ96AP4 578 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 CCDC138Q96M89 665 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 CYTH2Q99418 400 aa17.69■□□□□ 0.42
HLA-F-220ENST00000434407 NOVA2Q9UNW9 492 aaKnown RBP17.69■□□□□ 0.42
HLA-F-220ENST00000434407 FAM208BQ5VWN6 2430 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 TARM1B6A8C7 271 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 MAP3K7O43318 606 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 MAGP20916 626 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 SAT1P21673 171 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 PSMB5P28074 263 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 ZNF460Q14592 562 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms