RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 MAGIXQ9H6Y5 334 aa11.5□□□□□ -0.57
CD44-209ENST00000433892 RMND5AQ9H871 391 aa11.5□□□□□ -0.57
CD44-209ENST00000433892 GPN2Q9H9Y4 310 aaPredicted RBP11.5□□□□□ -0.57
CD44-209ENST00000433892 ZDHHC3Q9NYG2 299 aa11.5□□□□□ -0.57
CD44-209ENST00000433892 FBXO10Q9UK96 956 aa11.5□□□□□ -0.57
CD44-209ENST00000433892 BLOC1S6Q9UL45 172 aa11.5□□□□□ -0.57
CD44-209ENST00000433892 AP3M1Q9Y2T2 418 aa11.5□□□□□ -0.57
CD44-209ENST00000433892 SCN8AQ9UQD0 1980 aa11.5□□□□□ -0.57
CD44-209ENST00000433892 AGAP14A8MT82 685 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 UPK3BL1B0FP48 263 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 UPK3BL2E5RIL1 263 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 SLC1A7O00341 560 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 RFXANKO14593 260 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 XPNPEP2O43895 674 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 RECQL5O94762 991 aaPredicted RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 INMTO95050 263 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 ZNF682O95780 498 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 ALDH1A1P00352 501 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 INHAP05111 366 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CTSOP43234 321 aaPredicted RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 MAPK8P45983 427 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 PPP3CCP48454 512 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 PTSQ03393 145 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 PTCHD3Q3KNS1 767 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 SPOUT1Q5T280 376 aaKnown RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 OR4F3Q6IEY1 312 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 NEK5Q6P3R8 708 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 GALNT18Q6P9A2 607 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 DEFB128Q7Z7B8 93 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 GALNT10Q86SR1 603 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 VRK3Q8IV63 474 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 ZDHHC21Q8IVQ6 265 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CHPFQ8IZ52 775 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CBARPQ8N350 705 aaPredicted RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 SLC15A4Q8N697 577 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 BEND7Q8N7W2 519 aaPredicted RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 DDHD1Q8NEL9 900 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 OR2AP1Q8NGE2 309 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CNIH3Q8TBE1 160 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CD99L2Q8TCZ2 262 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 REXO5Q96IC2 774 aaKnown RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 MAGED4Q96JG8 741 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 APOLD1Q96LR9 279 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 INTS6Q9UL03 887 aaKnown RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 BAG5Q9UL15 447 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 SNX6Q9UNH7 406 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 MAN2B2Q9Y2E5 1009 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CORINQ9Y5Q5 1042 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 BCKDKO14874 412 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 MAN1A2O60476 641 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 FTH1P02794 183 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CBSLP0DN79 551 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CYP4B1P13584 511 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 HOXB9P17482 250 aaPredicted RBP11.49□□□□□ -0.57
CD44-209ENST00000433892 ITPKAP23677 461 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 HTR1BP28222 390 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CBSP35520 551 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 PSMD7P51665 324 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 GABARAPL2P60520 117 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CYP4F8P98187 520 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 IL5RAQ01344 420 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 IL1RL1Q01638 556 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 RAPSNQ13702 412 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 SPCS2Q15005 226 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CARD16Q5EG05 197 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 CRTC3Q6UUV7 619 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 FKBP9P1Q75LS8 142 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 ZNF554Q86TJ5 538 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 HIPK1Q86Z02 1210 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 BBS7Q8IWZ6 715 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 DNAJB8Q8NHS0 232 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 VOPP1Q96AW1 172 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 FKBP10Q96AY3 582 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 NODALQ96S42 347 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 EBPLQ9BY08 206 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 AASSQ9UDR5 926 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 ABCG2Q9UNQ0 655 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 SLC22A14Q9Y267 594 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 ORC6Q9Y5N6 252 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 SNX5Q9Y5X3 404 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 DGKBQ9Y6T7 804 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 SCN5AQ14524 2016 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 PDE4DIPQ5VU43 2346 aa11.49□□□□□ -0.57
CD44-209ENST00000433892 KCNE1BA0A087WTH5 132 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 WNT9AO14904 365 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 PRAMEF4O60810 478 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
CD44-209ENST00000433892 CLPXO76031 633 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 ARHGEF15O94989 841 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 DIRAS1O95057 198 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 SOD2P04179 222 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 CKMP06732 381 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 HIST1H2AGP0C0S8 130 aaPredicted RBP11.48□□□□□ -0.57
CD44-209ENST00000433892 PRPS2P11908 318 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 HIST1H2ADP20671 130 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 LHCGRP22888 699 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 FSHRP23945 695 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 IGFBP5P24593 272 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 CSNK1DP48730 415 aa11.48□□□□□ -0.57
CD44-209ENST00000433892 RAD23AP54725 363 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms