RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 FAM153AQ9UHL3 310 aa7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 TEKT2Q9UIF3 430 aa7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 PLCL2Q9UPR0 1127 aa7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 TDRKHQ9Y2W6 561 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 MRPS2Q9Y399 296 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 CSAG2Q9Y5P2 127 aa7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 BZW2Q9Y6E2 419 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 SPTBP11277 2137 aa7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 PCNX1Q96RV3 2341 aa7.55□□□□□ -1.2
ECHDC1-207ENST00000430841 MYO7BQ6PIF6 2116 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 NSG1A0A0A6YYJ2 146 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 ISM1B1AKI9 464 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 F8W8V4 182 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 MASP2O00187 686 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 RASAL1O95294 804 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 ERVK-10P10266 1014 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 ATF4P18848 351 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 FDXRP22570 491 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 NSG1P42857 185 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 PPP2R2AP63151 447 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 DYNLT1P63172 113 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 TLE4Q04727 773 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 PRKG2Q13237 762 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 STX1AQ16623 288 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 BCL7AQ4VC05 210 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 TXNRD3NBQ6F5E7 133 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 RPUSD3Q6P087 351 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 SPNS3Q6ZMD2 512 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 TTLL10Q6ZVT0 673 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 NLRP9Q7RTR0 991 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 ZNF571Q7Z3V5 609 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 BTLAQ7Z6A9 289 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 TRIM73Q86UV7 250 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 IPMKQ8NFU5 416 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 OR52E1Q8NGJ3 308 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 SPATA22Q8NHS9 363 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 CTNNBL1Q8WYA6 563 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 EID2BQ96D98 161 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 MTFMTQ96DP5 389 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 TRIB3Q96RU7 358 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 COPS8Q99627 209 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 THAP2Q9H0W7 228 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 TFB2MQ9H5Q4 396 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 XKR8Q9H6D3 395 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 SOX17Q9H6I2 414 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 WDR54Q9H977 334 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 ZNF160Q9HCG1 818 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 SMOXQ9NWM0 555 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 ABI3Q9P2A4 366 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 FOXD3Q9UJU5 478 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 ASF1AQ9Y294 204 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 SPO11Q9Y5K1 396 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 FAM169AQ9Y6X4 670 aa7.54□□□□□ -1.2
ECHDC1-207ENST00000430841 SEC16AO15027 2179 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 A0A1B0GTH6 734 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 C17orf113A0A1B0GUU1 675 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 CCDC78A2IDD5 438 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 A6NHS1 94 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 FAM227AF5H4B4 570 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 DDX3XO00571 662 aaKnown RBP eCLIP7.53□□□□□ -1.27e-10■■■□□ 16
ECHDC1-207ENST00000430841 PCDH17O14917 1159 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 AURKAO14965 403 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 GPR39O43194 453 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 BUD23O43709 281 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 SLC19A2O60779 497 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 CLDN14O95500 239 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 CRTAMO95727 393 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 HPP00738 406 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 ALBP02768 609 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 KRT1P04264 644 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 RPN2P04844 631 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 UMODP07911 640 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 ABOP16442 354 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 UGT2B7P16662 529 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 CA7P43166 264 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 WNT3AP56704 352 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 RPA4Q13156 261 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 GRM7Q14831 915 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 SLC5A12Q1EHB4 618 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 ZNF789Q5FWF6 425 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 ZC3H12BQ5HYM0 836 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 SIRPB2Q5JXA9 342 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 ABHD17BQ5VST6 288 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 SHISA6Q6ZSJ9 500 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 MTERF4Q7Z6M4 381 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 TMEM200AQ86VY9 491 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 RAB42Q8N4Z0 105 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 CHDHQ8NE62 594 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 DNAJB8Q8NHS0 232 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 GSDMBQ8TAX9 411 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 EPS8L3Q8TE67 593 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 CA5BP1Q8WTZ4 195 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 TFB1MQ8WVM0 346 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 TFGQ92734 400 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 ALS2CR12Q96Q35 445 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 LMF1Q96S06 567 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 RSRP1Q9BUV0 290 aa7.53□□□□□ -1.2
ECHDC1-207ENST00000430841 YIPF2Q9BWQ6 316 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms