RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PTCHD3Q3KNS1 767 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 PLEKHG6Q3KR16 790 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 ANKRD26P1Q6NSI1 321 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 RBM12BQ8IXT5 1001 aaKnown RBP12.34□□□□□ -0.43
CPNE4-201ENST00000429747 HSH2DQ96JZ2 352 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 ATOH8Q96SQ7 321 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 SLC32A1Q9H598 525 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 THUMPD1Q9NXG2 353 aaKnown RBP12.34□□□□□ -0.43
CPNE4-201ENST00000429747 VAPAQ9P0L0 249 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 ZNF451Q9Y4E5 1061 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
CPNE4-201ENST00000429747 RPLP0P05388 317 aaKnown RBP12.33□□□□□ -0.43
CPNE4-201ENST00000429747 RELAQ04206 551 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 SMARCB1Q12824 385 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 APOFQ13790 326 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 DSC3Q14574 896 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 ERAP2Q6P179 960 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 NCCRP1Q6ZVX7 275 aaPredicted RBP12.33□□□□□ -0.43
CPNE4-201ENST00000429747 CCDC80Q76M96 950 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 UBE2J2Q8N2K1 259 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 RDH12Q96NR8 316 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 ARNT2Q9HBZ2 717 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 CPQQ9Y646 472 aa12.33□□□□□ -0.43
CPNE4-201ENST00000429747 BCKDHAP12694 445 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 PORP16435 677 aaPredicted RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 PRPS1L1P21108 318 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 PON2Q15165 354 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 HKDC1Q2TB90 917 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 FRG2Q64ET8 278 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 OR10G2Q8NGC3 310 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 FRG2BQ96QU4 278 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 CD244Q9BZW8 370 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 MARCH7Q9H992 704 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 TMEM30AQ9NV96 361 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 AASSQ9UDR5 926 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 SSR3Q9UNL2 185 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 PCDHGA8Q9Y5G5 932 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 CCDC182A6NF36 153 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 KDELR3O43731 214 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 BCAS1O75363 584 aaPredicted RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 TNFRSF21O75509 655 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 GJB5O95377 273 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 CHRNA1P02708 482 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 GGT1P19440 569 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 ASMTP46597 345 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 GANABQ14697 944 aaKnown RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 KLHL17Q6TDP4 642 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 EPHX4Q8IUS5 362 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 RAVER1Q8IY67 606 aaKnown RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 SCML4Q8N228 414 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 BBS4Q96RK4 519 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 ABCB9Q9NP78 766 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 CD300AQ9UGN4 299 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 MAPRE3Q9UPY8 281 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 PCDHGB3Q9Y5G1 929 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 MYADML2A6NDP7 307 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 SAP18O00422 153 aaKnown RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 EOMESO95936 686 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 UGT2B15P54855 530 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 NCS1P62166 190 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 FAM189BP81408 668 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 GCNT6Q5T4J0 391 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 LINC01465Q8N7H1 131 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 C1GALT1C1Q96EU7 318 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 RNFT2Q96EX2 444 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 DMRTB1Q96MA1 342 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 Q96MT0 163 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 CNPPD1Q9BV87 410 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 RMI1Q9H9A7 625 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 C11orf16Q9NQ32 467 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 KIAA1522Q9P206 1035 aaPredicted RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 FZD4Q9ULV1 537 aa12.33□□□□□ -0.44
CPNE4-201ENST00000429747 RUVBL1Q9Y265 456 aaKnown RBP12.33□□□□□ -0.44
CPNE4-201ENST00000429747 EBLN1P0CF75 366 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 GSTM2P28161 218 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ALDH3B2P48448 385 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 CYP4F8P98187 520 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ZFP69Q49AA0 526 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ARHGAP15Q53QZ3 475 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 FAM131AQ6UXB0 335 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ARMC8Q8IUR7 673 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF614Q8N883 585 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 IL4I1Q96RQ9 567 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ZC4H2Q9NQZ6 224 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF221Q9UK13 617 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 PIPSLA2A3N6 862 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 PLK4O00444 970 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 SEPT4O43236 478 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 NR2F1P10589 423 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 PSMA1P25786 263 aaKnown RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 TALDO1P37837 337 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF404Q494X3 552 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 IFI44LQ53G44 452 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 TPRG1LQ5T0D9 272 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 C6orf183Q5T699 404 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms