RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 VASH1Q7L8A9 365 aaPredicted RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 CYP4Z1Q86W10 505 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 APCDD1Q8J025 514 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 ARL14EPQ8N8R7 260 aaPredicted RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 NCLNQ969V3 563 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 LGALS12Q96DT0 336 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 ASPSCR1Q9BZE9 553 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 HOXD1Q9GZZ0 328 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 TNKS2Q9H2K2 1166 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 RIBC2Q9H4K1 309 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 SNPHO15079 494 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 EPOP01588 193 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 EIF2DP41214 584 aaKnown RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 SUOXP51687 545 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 NEK2P51955 445 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 SMAD3P84022 425 aaKnown RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 TAF1AQ15573 450 aaPredicted RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 SYT16Q17RD7 645 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 STEAP3Q658P3 488 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 AFTPHQ6ULP2 937 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 TPGS1Q6ZTW0 290 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 NPAS4Q8IUM7 802 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 ELMO1Q92556 727 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 MAGEE1Q9HCI5 957 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 SLC6A13Q9NSD5 602 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 TRMT6Q9UJA5 497 aaKnown RBP16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 C3orf18Q9UK00 162 aa16.47■□□□□ 0.23
PCDH8P1-201ENST00000428983 REV3LO60673 3130 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 CAPN1P07384 714 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 OGNP20774 298 aaKnown RBP16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 SERPINB10P48595 397 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 VAC14Q08AM6 782 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GRIK2Q13002 908 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 PWP1Q13610 501 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GBX1Q14549 363 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 MBOAT1Q6ZNC8 495 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GPRIN3Q6ZVF9 776 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 SPATC1Q76KD6 591 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GALNT7Q86SF2 657 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 FATE1Q969F0 183 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 APOL5Q9BWW9 433 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 SMG9Q9H0W8 520 aaKnown RBP16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 ZBTB20Q9HC78 741 aaPredicted RBP16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 NECTIN3Q9NQS3 549 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 THG1LQ9NWX6 298 aaKnown RBP16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 PRSS21Q9Y6M0 314 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 CHD5Q8TDI0 1954 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 LCHNA4D1U4 455 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 FFAR3O14843 346 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GPR42O15529 346 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 PAX3P23760 479 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 CSKP41240 450 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 HNRNPFP52597 415 aaKnown RBP16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 PPP5CP53041 499 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 NR6A1Q15406 480 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 SGO1Q5FBB7 561 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 ADGRF1Q5T601 910 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 ARMC12Q5T9G4 340 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GCNT7Q6ZNI0 430 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GPSM1Q86YR5 675 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 MCFD2Q8NI22 146 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 RDH12Q96NR8 316 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 GPR63Q9BZJ6 419 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 DERL2Q9GZP9 239 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 SYTL2Q9HCH5 934 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 RASSF1Q9NS23 344 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 SLC25A37Q9NYZ2 338 aa16.46■□□□□ 0.23
PCDH8P1-201ENST00000428983 CLDN11O75508 207 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 DIRAS1O95057 198 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 TRIM16O95361 564 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 RHOAP61586 193 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 TOP3AQ13472 1001 aaPredicted RBP16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 PON2Q15165 354 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 MFSD4BQ5TF39 518 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 METTL6Q8TCB7 284 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 PHF10Q8WUB8 498 aaKnown RBP16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 TRIT1Q9H3H1 467 aaKnown RBP16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 USE1Q9NZ43 259 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 TRPM5Q9NZQ8 1165 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 IFT52Q9Y366 437 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 PIKFYVEQ9Y2I7 2098 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 CXCR6O00574 342 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 ANKRD28O15084 1053 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 RFPL2O75678 378 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 MLYCDO95822 493 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 CCDC159P0C7I6 412 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 SLC35A2P78381 396 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 AP5B1Q2VPB7 878 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 RFLNAQ6ZTI6 216 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 PLD3Q8IV08 490 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 MSRB3Q8IXL7 192 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 EID3Q8N140 333 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 ZNF540Q8NDQ6 660 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 NETO1Q8TDF5 533 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 C6orf62Q9GZU0 229 aaPredicted RBP16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 NSUN3Q9H649 340 aaKnown RBP16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 GORASP2Q9H8Y8 452 aa16.45■□□□□ 0.22
PCDH8P1-201ENST00000428983 HMX1Q9NP08 348 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms