RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 VWA5B1Q5TIE3 1220 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 PTERQ96BW5 349 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 SNRNP40Q96DI7 357 aaKnown RBP14.89□□□□□ -0.03
SEC13-210ENST00000428626 MFSD3Q96ES6 412 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 ZNF285Q96NJ3 590 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 BIRC8Q96P09 236 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 SPSB2Q99619 263 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 C17orf62Q9BQA9 187 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 NDC1Q9BTX1 674 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 SLAMF7Q9NQ25 335 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 EIF2B3Q9NR50 452 aaKnown RBP14.89□□□□□ -0.03
SEC13-210ENST00000428626 SYBUQ9NX95 663 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 GALPQ9UBC7 116 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 A0A1B0GX78 115 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 A0A1W2PPV9 198 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 GOLGA8KD6RF30 607 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 GOLGA8TH3BQL2 631 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 AGFG2O95081 481 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 C1orf105O95561 183 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 ONECUT2O95948 504 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 S1PR4O95977 384 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 ALAS2P22557 587 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 RPS3P23396 243 aaKnown RBP eCLIP14.88□□□□□ -0.03
SEC13-210ENST00000428626 MGAT1P26572 445 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 TTPAP49638 278 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 RPS6KA1Q15418 735 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 SF1Q15637 639 aaKnown RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 CRB2Q5IJ48 1285 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 AARS2Q5JTZ9 985 aaKnown RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 FHL5Q5TD97 284 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 PTRHD1Q6GMV3 140 aaKnown RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 DRICH1Q6PGQ1 229 aaPredicted RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 HPS6Q86YV9 775 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 METTL27Q8N6F8 245 aaPredicted RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 FER1L6-AS2Q96M78 137 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 IP6K3Q96PC2 410 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 TRIM56Q9BRZ2 755 aaKnown RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 SYNPO2LQ9H987 977 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 LRRC4CQ9HCJ2 640 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 ENAMQ9NRM1 1142 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 CUTCQ9NTM9 273 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 C5AR2Q9P296 337 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 CTSFQ9UBX1 484 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 ANAPC5Q9UJX4 755 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 TTC7AQ9ULT0 858 aaPredicted RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 DRG1Q9Y295 367 aaKnown RBP14.88□□□□□ -0.03
SEC13-210ENST00000428626 CSAG2Q9Y5P2 127 aa14.88□□□□□ -0.03
SEC13-210ENST00000428626 POLEQ07864 2286 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 SOCS6O14544 535 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 KDM1AO60341 852 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 NIPSNAP2O75323 286 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 F7P08709 466 aaPredicted RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 SOX8P57073 446 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 BASP1P80723 227 aaKnown RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 FASTKQ14296 549 aaKnown RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 GBX1Q14549 363 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 NKG7Q16617 165 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 FRMPD2BQ6IN97 320 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 IGFL3Q6UXB1 125 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 SHISA6Q6ZSJ9 500 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 OVCH1Q7RTY7 1134 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 CISD2Q8N5K1 135 aaKnown RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 CLEC1AQ8NC01 280 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 LPGAT1Q92604 370 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 FAM136AQ96C01 138 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 MIPEPQ99797 713 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 KIFC1Q9BW19 673 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 TSSK1BQ9BXA7 367 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 TSGA10Q9BZW7 698 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 SLC6A20Q9NP91 592 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 ASF1BQ9NVP2 202 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 STOX2Q9P2F5 926 aaPredicted RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 GNPTGQ9UJJ9 305 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 TSR3Q9UJK0 312 aaKnown RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 G3BP2Q9UN86 482 aaKnown RBP14.87□□□□□ -0.03
SEC13-210ENST00000428626 NTNG1Q9Y2I2 539 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 HS3ST3B1Q9Y662 390 aa14.87□□□□□ -0.03
SEC13-210ENST00000428626 LOC105369274A0A096LPK9 316 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 LOC102723532A0A0G2JNH3 316 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 FITM1A5D6W6 292 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 F8W8V4 182 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 AGPSO00116 658 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 PEX12O00623 359 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 DSCR3O14972 297 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 VAPBO95292 243 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 FGGP02679 453 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 RPN2P04844 631 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 MMP11P24347 488 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 PPARGP37231 505 aaPredicted RBP14.86□□□□□ -0.03
SEC13-210ENST00000428626 OR1D4P47884 311 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 TERF1P54274 439 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 EIF3BP55884 814 aaKnown RBP14.86□□□□□ -0.03
SEC13-210ENST00000428626 TMED2Q15363 201 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 CNSTQ6PJW8 725 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 OR4N4Q8N0Y3 316 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 MPP5Q8N3R9 675 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 OR2A1Q8NGT9 310 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 DLG3Q92796 817 aa14.86□□□□□ -0.03
SEC13-210ENST00000428626 FKBP10Q96AY3 582 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms