RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 PDPRQ8NCN5 879 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TRPV3Q8NET8 790 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 BTBD9Q96Q07 612 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 ZBTB18Q99592 522 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 HEPHQ9BQS7 1158 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 OR51B5Q9H339 312 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TNPO3Q9Y5L0 923 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 FADS3Q9Y5Q0 445 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TCF20Q9UGU0 1960 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SCN3AQ9NY46 2000 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 RTCAO00442 366 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 DENRO43583 198 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 CST1P01037 141 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 LDLRP01130 860 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 PTPN2P17706 415 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 MAP4P27816 1152 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 NNMTP40261 264 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TPD52P55327 224 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 CYP4F3Q08477 520 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 NFE2L1Q14494 772 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SULT1C3Q6IMI6 304 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 CCDC149Q6ZUS6 474 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 VN1R2Q8NFZ6 395 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SPPL3Q8TCT6 385 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 UBE2FQ969M7 185 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SH3KBP1Q96B97 665 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 RMND5BQ96G75 393 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SLC32A1Q9H598 525 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 AGPAT4Q9NRZ5 378 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 EBF1Q9UH73 591 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 RAB26Q9ULW5 256 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 NEUROG3Q9Y4Z2 214 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TRPM6Q9BX84 2022 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 GNG14A0A1W2PPG7 69 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 ACOX3O15254 700 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 TNFAIP8O95379 198 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 PENKP01210 267 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 SERPIND1P05546 499 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 SDC1P18827 310 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 FUT4P22083 530 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 JAK1P23458 1154 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 S100A3P33764 101 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 PBX2P40425 430 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 DGKGP49619 791 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 SEC13P55735 322 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 RPS14P62263 151 aaKnown RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 MERTKQ12866 999 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 TMEM115Q12893 351 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 SIM2Q14190 667 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 MACC1Q6ZN28 852 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 SYT12Q8IV01 421 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 PLA2G15Q8NCC3 412 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 ZNF597Q96LX8 424 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 BRINP2Q9C0B6 783 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 CCDC90BQ9GZT6 254 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 SPNS1Q9H2V7 528 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 C1orf109Q9NX04 203 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 RAPGEFL1Q9UHV5 662 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 RIMKLBQ9ULI2 386 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 HS3ST2Q9Y278 367 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 TCRBV5S2A0A599 114 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 TBC1D3BA6NDS4 549 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 BBIP1A8MTZ0 92 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 SGTAO43765 313 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 HS6ST1O60243 411 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 GMNNO75496 209 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 MAT2AP31153 395 aaKnown RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 TRAP1Q12931 704 aaKnown RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 DOC2AQ14183 400 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 OGFOD2Q6N063 350 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 CLVS1Q8IUQ0 354 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 TMEM159Q96B96 161 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 OR4K3Q96R72 315 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 RHNO1Q9BSD3 238 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 EMILIN2Q9BXX0 1053 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
PTPRN-204ENST00000423636 PRKAG2Q9UGJ0 569 aa11.59□□□□□ -0.55
PTPRN-204ENST00000423636 TRBV23OR9-2A0A075B6M9 112 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 AGRPO00253 132 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 LZTS3O60299 673 aaPredicted RBP11.58□□□□□ -0.55
PTPRN-204ENST00000423636 LAMP1P11279 417 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 PFKLP17858 780 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 SHMT2P34897 504 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 PPM1AP35813 382 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 PIGAP37287 484 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 CCT8P50990 548 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 CNTN1Q12860 1018 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 OLIG3Q7RTU3 272 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 OR52J3Q8NH60 311 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 ASB11Q8WXH4 323 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 SMG7Q92540 1137 aaKnown RBP11.58□□□□□ -0.55
PTPRN-204ENST00000423636 FAM120BQ96EK7 910 aaKnown RBP11.58□□□□□ -0.55
PTPRN-204ENST00000423636 PANX1Q96RD7 426 aa11.58□□□□□ -0.55
PTPRN-204ENST00000423636 NUSAP1Q9BXS6 441 aaKnown RBP11.58□□□□□ -0.55
PTPRN-204ENST00000423636 RFXANKO14593 260 aa11.58□□□□□ -0.56
PTPRN-204ENST00000423636 SOCS5O75159 536 aa11.58□□□□□ -0.56
PTPRN-204ENST00000423636 FKBP9O95302 570 aa11.58□□□□□ -0.56
PTPRN-204ENST00000423636 HSD17B1P14061 328 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms