RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 MYOGP15173 224 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 SMAD4Q13485 552 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 NR0B2Q15466 257 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 MAFAQ8NHW3 353 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ZDHHC1Q8WTX9 485 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 SLC35G5Q96KT7 338 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 VPS35Q96QK1 796 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 KLHL1Q9NR64 748 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 KLRF1Q9NZS2 232 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 NRXN2Q9P2S2 1712 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 A0A1W2PPM1 405 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 H0YGN5 161 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 DEFA1P59665 94 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 DEFA3P59666 94 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 PSME3P61289 254 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 MLF2Q15773 248 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 MPP7Q5T2T1 576 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 DHDDSQ86SQ9 333 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 LINC00597Q9H2U6 94 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 FBRSL1Q9HCM7 1045 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 HHATLQ9HCP6 504 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 FZD3Q9NPG1 666 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 MAGEL2Q9UJ55 1249 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ZNF229Q9UJW7 825 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 A8MUI8 341 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 H3BNC9 293 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 LYPLA1O75608 230 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 NEK2P51955 445 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 PDX1P52945 283 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 DPY19L1Q2PZI1 675 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 KLHL24Q6TFL4 600 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 GPR141Q7Z602 305 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 C12orf40Q86WS4 652 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 SLC35B2Q8TB61 432 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 RHBDD1Q8TEB9 315 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 SMPDL3BQ92485 455 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 PAK6Q9NQU5 681 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 MS4A12Q9NXJ0 267 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 BRCA1P38398 1863 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 SOBPA7XYQ1 873 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 NRP2O60462 931 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 CST1P01037 141 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 ASGR2P07307 311 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TSPAN19P0C672 248 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TAS2R39P59534 338 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TIGD2Q4W5G0 525 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 ARL13AQ5H913 290 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 FRG2Q64ET8 278 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TMIGD1Q6UXZ0 262 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 FSTL5Q8N475 847 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 MMABQ96EY8 250 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 FRG2BQ96QU4 278 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 NOL6Q9H6R4 1146 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 STX11O75558 287 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 PDE5AO76074 875 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 OR4F21O95013 312 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 CD247P20963 164 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 FBLP22087 321 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 HNRNPH1P31943 449 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 C11orf65Q8NCR3 313 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 ISG20Q96AZ6 181 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 RNFT2Q96EX2 444 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 REXO4Q9GZR2 422 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 MUC13Q9H3R2 512 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 SLC17A7Q9P2U7 560 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TMED5Q9Y3A6 229 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 MGRN1O60291 552 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 STC1P52823 247 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 MYBPC1Q00872 1141 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 KCNJ11Q14654 390 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 FAM92BQ6ZTR7 304 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 FAM13CQ8NE31 585 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 PYCR2Q96C36 320 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 ZBP1Q9H171 429 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 A8MUA0 341 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 MAGEB17A8MXT2 336 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 HOXC13P31276 330 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 RAB28P51157 221 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 CSNK2BP67870 215 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 HHEXQ03014 270 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 C10orf62Q5T681 223 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 FAM91A1Q658Y4 838 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 NAPRTQ6XQN6 538 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TOE1Q96GM8 510 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 PREBQ9HCU5 417 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 SALL4Q9UJQ4 1053 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 OR1A2Q9Y585 309 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 A6NCN8 305 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TCF4P15884 667 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 IDH2P48735 452 aaKnown RBP10.48□□□□□ -0.73
PTCH1-206ENST00000421141 ZNF234Q14588 700 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 HKDC1Q2TB90 917 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 TXNRD3NBQ6F5E7 133 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 UTS2RQ9UKP6 389 aa10.48□□□□□ -0.73
PTCH1-206ENST00000421141 HIDE1A8MVS5 230 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 MAGEB3O15480 346 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 CHRM1P11229 460 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 GALK1P51570 392 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 RNF43Q68DV7 783 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 TTC27Q6P3X3 843 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms