RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 COL21A1Q96P44 957 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 OR51F1A6NGY5 319 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 FOXD2O60548 495 aaPredicted RBP12.1□□□□□ -0.47
CLCN4-203ENST00000421085 LCN1P31025 176 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 UFM1P61960 85 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 SNX29P2Q8IUI4 249 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 SDR16C5Q8N3Y7 309 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 GAL3ST3Q96A11 431 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 PYURFQ96I23 114 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF717Q9BY31 904 aaPredicted RBP12.1□□□□□ -0.47
CLCN4-203ENST00000421085 NUDT15Q9NV35 164 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 ZIM2Q9NZV7 527 aa12.1□□□□□ -0.47
CLCN4-203ENST00000421085 ZFP37Q9Y6Q3 630 aaPredicted RBP12.1□□□□□ -0.47
CLCN4-203ENST00000421085 K7EPI3 171 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SLITRK5O94991 958 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 DIRAS1O95057 198 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 C8GP07360 202 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 AVPR1BP47901 424 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 DUSP4Q13115 394 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 FKBP1CQ5VVH2 108 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 OR7D4Q8NG98 312 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ARMC5Q96C12 935 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 B3GNT4Q9C0J1 378 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SMURF2Q9HAU4 748 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 EMC3Q9P0I2 261 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 MAB21L2Q9Y586 359 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 NEDD8-MDP1E9PL57 170 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SAP18O00422 153 aaKnown RBP12.09□□□□□ -0.47
CLCN4-203ENST00000421085 GABRDO14764 452 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 MATN4O95460 622 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PGAM2P15259 253 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 NDST2P52849 883 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 TAF1AQ15573 450 aaPredicted RBP12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ELMOD2Q8IZ81 293 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 CLEC4CQ8WTT0 213 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 XKR8Q9H6D3 395 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SMAD9O15198 467 aaKnown RBP12.09□□□□□ -0.47
CLCN4-203ENST00000421085 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
CLCN4-203ENST00000421085 HTR1BP28222 390 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 KHKP50053 298 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 DGKEP52429 567 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 VLDLRP98155 873 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 GAD2Q05329 585 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SP140Q13342 867 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 VGLL4Q14135 290 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SCGB2B2Q4G0G5 96 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 TOR1AIP1Q5JTV8 583 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PYHIN1Q6K0P9 492 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ARL9Q6T311 187 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PAQR3Q6TCH7 311 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM126BQ8IUX1 230 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SLC30A8Q8IWU4 369 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PDZD7Q9H5P4 517 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PCDHGA11Q9Y5H2 935 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PPEF2O14830 753 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 STBD1O95210 358 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 CD2P06729 351 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF81P51508 661 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SLC10A7Q0GE19 358 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 DPYSL2Q16555 572 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
CLCN4-203ENST00000421085 SETD6Q8TBK2 473 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 OR8D1Q8WZ84 308 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 TUBA1CQ9BQE3 449 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 LPIN3Q9BQK8 851 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 CHMP1AQ9HD42 196 aaPredicted RBP12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ADAMTS6Q9UKP5 1117 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 TRAV6A0A075B6T7 132 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 GRM6O15303 877 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PENKP01210 267 aaPredicted RBP12.09□□□□□ -0.47
CLCN4-203ENST00000421085 RB1P06400 928 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ARL2P36404 184 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 RABGGTBP53611 331 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF45Q02386 682 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 TXNRD3NBQ6F5E7 133 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PAMR1Q6UXH9 720 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 PAQR7Q86WK9 346 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 OXR1Q8N573 874 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 HERC2P3Q9BVR0 1158 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 MIR1-1HGQ9H1L0 117 aa12.09□□□□□ -0.47
CLCN4-203ENST00000421085 ECI2O75521 394 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 DDX6P26196 483 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 HNRNPDQ14103 355 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 MPP2Q14168 576 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 RABL3Q5HYI8 236 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 FAAH2Q6GMR7 532 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 FAM129CQ86XR2 697 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 BEND7Q8N7W2 519 aaPredicted RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 GLIS1Q8NBF1 620 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 SRFBP1Q8NEF9 429 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 TMIEQ8NEW7 156 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 ATP6V1C2Q8NEY4 427 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 COQ8AQ8NI60 647 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 STOML3Q8TAV4 291 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 THAP6Q8TBB0 222 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PKP4Q99569 1192 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms