RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GBAP04062 536 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 KRT6BP04259 564 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 UGT2B4P06133 528 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 FUT4P22083 530 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 CCR7P32248 378 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 CD70P32970 193 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 KRT6CP48668 564 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 ZXDCQ2QGD7 858 aaPredicted RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 USP39Q53GS9 565 aaKnown RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 DCP2Q8IU60 420 aaKnown RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 ABHD11Q8NFV4 315 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 MAL2Q969L2 176 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 MED8Q96G25 268 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 CLSTN3Q9BQT9 956 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 MYOFQ9NZM1 2061 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 AGRPO00253 132 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 CA12O43570 354 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 CLPXO76031 633 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 SEC14L2O76054 403 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 C7P10643 843 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 GP2P55259 537 aaKnown RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 LAIR1Q6GTX8 287 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 PDE12Q6L8Q7 609 aaKnown RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 DNAJB7Q7Z6W7 309 aaPredicted RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 TMEM132CQ8N3T6 1108 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 SCAMP4Q969E2 229 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 PLD4Q96BZ4 506 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 VN1R3Q9BXE9 311 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 CLMPQ9H6B4 373 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 PDP1Q9P0J1 537 aaPredicted RBP11.59□□□□□ -0.55
LIMK1-202ENST00000418310 CDH7Q9ULB5 785 aa11.59□□□□□ -0.55
LIMK1-202ENST00000418310 TRIM64A6NGJ6 449 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 IL6P05231 212 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NUDT7P0C024 238 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 SDC1P18827 310 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 PBLDP30039 288 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NCS1P62166 190 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 DNASE1L3Q13609 305 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 GPNMBQ14956 572 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 SYT16Q17RD7 645 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 TRIM16LQ309B1 348 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 PAGE2BQ5JRK9 111 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 DGKKQ5KSL6 1271 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 FAM180BQ6P0A1 224 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 CERS6Q6ZMG9 384 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 HORMAD1Q86X24 394 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 ZNF540Q8NDQ6 660 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 RAB2BQ8WUD1 216 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 ALOXE3Q9BYJ1 711 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 REXO4Q9GZR2 422 aaKnown RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 MAGEE1Q9HCI5 957 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 ZNF334Q9HCZ1 680 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 DCAF13Q9NV06 445 aaKnown RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 BLOC1S6Q9UL45 172 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 GMEB1Q9Y692 573 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 M0R129 80 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 M0R3G1 203 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 FZD6O60353 706 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NDUFS2O75306 463 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 RPLP2P05387 115 aaKnown RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 SELPP16109 830 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 EPORP19235 508 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 TPP2P29144 1249 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 SPAM1P38567 509 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 EMX1Q04741 257 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 ABRQ12979 859 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NEK5Q6P3R8 708 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 AHSA2Q719I0 299 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 SYT12Q8IV01 421 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 BBS7Q8IWZ6 715 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 CMTM8Q8IZV2 173 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NXPE1Q8N323 547 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 OR52J3Q8NH60 311 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 ZFP90Q8TF47 636 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 DOK1Q99704 481 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 TMEFF2Q9UIK5 374 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 SAMHD1Q9Y3Z3 626 aaKnown RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 FUOMA2VDF0 154 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 H7C0S8 307 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NADKO95544 446 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 NPPAP01160 153 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 HIST1H2AGP0C0S8 130 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-202ENST00000418310 HIST1H2ADP20671 130 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 WEE1P30291 646 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 RXRGP48443 463 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 ISL1P61371 349 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 VLDLRP98155 873 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 VEPH1Q14D04 833 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 MOGQ16653 247 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 C5orf22Q49AR2 442 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 GPRC6AQ5T6X5 926 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 OR5K1Q8NHB7 308 aa11.58□□□□□ -0.56
LIMK1-202ENST00000418310 RAET1EQ8TD07 263 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms