RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ARNT2Q9HBZ2 717 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 AP3M1Q9Y2T2 418 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 GBF1Q92538 1859 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 MKI67P46013 3256 aaKnown RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ENPP3O14638 875 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TSPAN1O60635 241 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 SCO1O75880 301 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 HOXB8P17481 243 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ARF4P18085 180 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 FPR1P21462 350 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 DNAJA1P31689 397 aaKnown RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 MAPK12P53778 367 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 NPRL3Q12980 569 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 GTF2H3Q13889 308 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TRIM60Q495X7 471 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ATPAF2Q8N5M1 289 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 UBASH3BQ8TF42 649 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 REPS1Q96D71 796 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TEPSINQ96N21 525 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 MYOCQ99972 504 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM83DQ9H4H8 585 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 PCTPQ9UKL6 214 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 RNF112Q9ULX5 631 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ABCG2Q9UNQ0 655 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 AUP1Q9Y679 476 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 CLCA1A8K7I4 914 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM220BPB1ANY3 271 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 DFFAO00273 331 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TRIM3O75382 744 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 HLA-DQB2P05538 268 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 LAMTOR1Q6IAA8 161 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 EFCAB12Q6NXP0 572 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 C19orf48Q6RUI8 117 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TMPRSS11AQ6ZMR5 421 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TRIM48Q8IWZ4 208 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 LRRC52Q8N7C0 313 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 OR10Q1Q8NGQ4 319 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 LHFPL5Q8TAF8 219 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR151Q8TDV0 419 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 HRASLS5Q96KN8 279 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 COL21A1Q96P44 957 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ZSCAN5AQ9BUG6 496 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 GTPBP2Q9BX10 602 aaKnown RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 KCNN2Q9H2S1 579 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 OLA1Q9NTK5 396 aaKnown RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 PDP1Q9P0J1 537 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 PCDHGA6Q9Y5G7 932 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 RALGAPA2Q2PPJ7 1873 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 LINC00854A0A1B0GVQ3 168 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC35F4A4IF30 521 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 LINC00862A6NCI5 91 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 NT5C1B-RDH14C9J2C7 533 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 E5RI56 91 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 STX16O14662 325 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 RGS5O15539 181 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ERN1O75460 977 aaKnown RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 PTHP01270 115 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 MSL3P1P0C860 447 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 AZGP1P25311 298 aaKnown RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 AKT1P31749 480 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ARSDP51689 593 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 WNT3AP56704 352 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 SNRPD2P62316 118 aaKnown RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TMEM132BQ14DG7 1078 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TAB1Q15750 504 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 TIMM50Q3ZCQ8 353 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 RUNDC3AQ59EK9 446 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 GNASQ5JWF2 1037 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 GPRIN3Q6ZVF9 776 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 CALHM3Q86XJ0 350 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 RNF130Q86XS8 419 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 WDFY2Q96P53 400 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 HDHD5Q9BXW7 423 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 DUSP16Q9BY84 665 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 LIN7BQ9HAP6 207 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 KIF17Q9P2E2 1029 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 SPASTQ9UBP0 616 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 RWDD3Q9Y3V2 267 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 MYO1GB0I1T2 1018 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CCL22O00626 93 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 GABRDO14764 452 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 MATN3O15232 486 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 MAFKO60675 156 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 AOC2O75106 756 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ECI2O75521 394 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 GLULP15104 373 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 POU3F3P20264 500 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 RBBP7Q16576 425 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 MAPKAPK3Q16644 382 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC35F1Q5T1Q4 408 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ATG9BQ674R7 924 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 METTL7BQ6UX53 244 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 GCNT7Q6ZNI0 430 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 PLPP6Q8IY26 295 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF557Q8N988 423 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 KCTD13Q8WZ19 329 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 GGHQ92820 318 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 COQ8BQ96D53 544 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms