RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NMUR1Q9HB89 426 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 TRPC7Q9HCX4 862 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 WDR6Q9NNW5 1121 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PAPOLBQ9NRJ5 636 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZDHHC18Q9NUE0 388 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 DNAJC17Q9NVM6 304 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ARHGEF38Q9NXL2 777 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 DONSONQ9NYP3 566 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CLIC5Q9NZA1 410 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 GRHL1Q9NZI5 618 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 MSRB1Q9NZV6 116 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CWC15Q9P013 229 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 VPS18Q9P253 973 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 KLHL8Q9P2G9 620 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM153AQ9UHL3 310 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 FBXW11Q9UKB1 542 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 INSL5Q9Y5Q6 135 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 SNX10Q9Y5X0 201 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 DOCK4Q8N1I0 1966 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 MYLKQ15746 1914 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 A0A087WUV0 522 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMEM272A0A1B0GTI8 110 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 BCLAF3A2AJT9 711 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 TYW5A2RUC4 315 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 SMIM23A6NLE4 172 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 E9PAM4 449 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 F5H5T6 163 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 H3BQF6 201 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 GOLGA8MH3BSY2 632 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RNF103O00237 685 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 DFFAO00273 331 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 POLR3GO15318 223 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CHADO15335 359 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 EIF3HO15372 352 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 NCAM2O15394 837 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ADAM12O43184 909 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 VNN2O95498 520 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ACSL3O95573 720 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 GLUD1P00367 558 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 IRF1P10914 325 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MBL2P11226 248 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 IL4RP24394 825 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATP5DP30049 168 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC5A2P31639 672 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PHBP35232 272 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RPL22P35268 128 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CHKAP35790 457 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATP5C1P36542 298 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 FDFT1P37268 417 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PPP3CCP48454 512 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HCAR3P49019 387 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HARS2P49590 506 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 EIF3BP55884 814 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CBX1P83916 185 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PDIA2Q13087 525 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATP1A4Q13733 1029 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CBFBQ13951 182 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 DPYSQ14117 519 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRPSAP1Q14558 356 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 KRT71Q3SY84 523 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANXA2RQ3ZCQ2 193 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MIDNQ504T8 468 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 DNAJC21Q5F1R6 531 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HECTD3Q5T447 861 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RNASEH2BQ5TBB1 312 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 LIPMQ5VYY2 423 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ITPRIPL1Q6GPH6 555 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HIBCHQ6NVY1 386 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 TLDC1Q6P9B6 456 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RHBDF2Q6PJF5 856 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 LRIG3Q6UXM1 1119 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 TRMT10CQ7L0Y3 403 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 UNC45BQ8IWX7 931 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCDC13Q8IYE1 715 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 GPR65Q8IYL9 337 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZBED8Q8IZ13 594 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PDIK1LQ8N165 341 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZCCHC9Q8N567 271 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RTL3Q8N8U3 475 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 GLIS1Q8NBF1 620 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF461Q8TAF7 563 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCDC110Q8TBZ0 833 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PHOSPHO2Q8TCD6 241 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HTR3CQ8WXA8 447 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HERVK_113Q902F9 699 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MRPS31Q92665 395 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRCCQ92733 491 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 EXOC4Q96A65 974 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HDAC11Q96DB2 347 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 THOC3Q96J01 351 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PKNOX2Q96KN3 472 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 BTN2A3PQ96KV6 586 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MARK4Q96L34 752 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 C9orf72Q96LT7 481 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 SPATA13Q96N96 652 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RPRD1AQ96P16 312 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 OLFM3Q96PB7 478 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RAD9AQ99638 391 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 DDX50Q9BQ39 737 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CLSTN3Q9BQT9 956 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms