RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 ACTR5Q9H9F9 607 aaPredicted RBP13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 IRAK4Q9NWZ3 460 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 GALPQ9UBC7 116 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 CIDEBQ9UHD4 219 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 CROTQ9UKG9 612 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 SRPK3Q9UPE1 567 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 PLCL2Q9UPR0 1127 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 PCDHGA6Q9Y5G7 932 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 LAMA5O15230 3695 aa13.69□□□□□ -0.22
SLC13A3-205ENST00000417157 TARM1B6A8C7 271 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 TP73O15350 636 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 OR2B3O76000 313 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 CCNDBP1O95273 360 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 AHSGP02765 367 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 C8GP07360 202 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 F7P08709 466 aaPredicted RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 ERGP11308 486 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 TCN2P20062 427 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 RPS15P62841 145 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 DNASE1L3Q13609 305 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 SOWAHCQ53LP3 525 aaPredicted RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 DUPD1Q68J44 220 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 LMNTD1Q8N9Z9 388 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 MNS1Q8NEH6 495 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 ASB11Q8WXH4 323 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 SMPDL3AQ92484 453 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 SLC39A7Q92504 469 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 ZNF592Q92610 1267 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 MR1Q95460 341 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 ZUFSPQ96AP4 578 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 SLC30A3Q99726 388 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 C17orf62Q9BQA9 187 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 WDR83Q9BRX9 315 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 SLC12A9Q9BXP2 914 aa13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 UTP6Q9NYH9 597 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 DSPP15924 2871 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-205ENST00000417157 ZSCAN9O15535 394 aaPredicted RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 SYF2O95926 243 aaKnown RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 RECKO95980 971 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 SFTPCP11686 197 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 WT1P19544 449 aaPredicted RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 AGXTP21549 392 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 MCM3P25205 808 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 CMPK1P30085 196 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 RPA3P35244 121 aaPredicted RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 MRPS25P82663 173 aaKnown RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 CDC20Q12834 499 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 ZIC1Q15915 447 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 CCSMST1Q4G0I0 132 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 TRMT10BQ6PF06 316 aaKnown RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 UBE2R2Q712K3 238 aaPredicted RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 C2orf73Q8N5S3 287 aaPredicted RBP13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 PROKR1Q8TCW9 393 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 CT55Q8WUE5 264 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 DLG3Q92796 817 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 PLAC1Q9HBJ0 212 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 FAM60AQ9NP50 221 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 GRHL1Q9NZI5 618 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 TXNDC16Q9P2K2 825 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 ANKMY1Q9P2S6 941 aa13.67□□□□□ -0.22
SLC13A3-205ENST00000417157 C9J4A7 227 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 GFYI3L273 518 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 MEN1O00255 615 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 SLC16A5O15375 505 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 ZNF749O43361 778 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 KATNA1O75449 491 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 GSTA2P09210 222 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 HIST1H2AGP0C0S8 130 aaPredicted RBP13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 HIST1H2ADP20671 130 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 GABRB3P28472 473 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 GABRA4P48169 554 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 PNLIPRP1P54315 467 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 PLTPP55058 493 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 IL2P60568 153 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 GPS2Q13227 327 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 FASTKD3Q14CZ7 662 aaKnown RBP13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 DEFB110Q30KQ9 67 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 TCTE1Q5JU00 501 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 RBM20Q5T481 1227 aaKnown RBP13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 HECTD2Q5U5R9 776 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 BORAQ6PGQ7 559 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 ZNF517Q6ZMY9 492 aaPredicted RBP13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 CEP128Q6ZU80 1094 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 PIWIL4Q7Z3Z4 852 aaKnown RBP13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 SYTL1Q8IYJ3 562 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 DSELQ8IZU8 1212 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 DNAJC22Q8N4W6 341 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 OR2L3Q8NG85 312 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 MCOLN3Q8TDD5 553 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 VPS39Q96JC1 886 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 HIST1H2AHQ96KK5 128 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 PKP4Q99569 1192 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 HIST1H2AJQ99878 128 aa13.66□□□□□ -0.22
SLC13A3-205ENST00000417157 H2AFJQ9BTM1 129 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms