RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ABCG2Q9UNQ0 655 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLITRK5O94991 958 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 HTR6P50406 440 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 PRKCZQ05513 592 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 MAPKAPK3Q16644 382 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 FAM174BQ3ZCQ3 159 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC27A1Q6PCB7 646 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 ARRDC4Q8NCT1 418 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZNF675Q8TD23 568 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 FBLIM1Q8WUP2 373 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 PDLIM5Q96HC4 596 aaKnown RBP14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 TBATAQ96M53 351 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZNF599Q96NL3 588 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 B3GNT4Q9C0J1 378 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZNF225Q9UK10 706 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 FBXW11Q9UKB1 542 aa14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 DNMT3AQ9Y6K1 912 aaPredicted RBP14.36□□□□□ -0.11
NCKIPSD-204ENST00000416649 C17orf102A2RUQ5 167 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CDC7O00311 574 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 ANKRD28O15084 1053 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 FHP07954 510 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 USP17L7P0C7H9 530 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 WEE1P30291 646 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SCNN1AP37088 669 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC9A3P48764 834 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 RPP38P78345 283 aaKnown RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 PTCHD3Q3KNS1 767 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CAPN13Q6MZZ7 669 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 NOTUMQ6P988 496 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 IDO2Q6ZQW0 420 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 NLRP8Q86W28 1048 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 DPP10Q8N608 796 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 ST13P5Q8NFI4 369 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 ACAT2Q9BWD1 397 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 TAS2R16Q9NYV7 291 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 HSPB11Q9Y547 144 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 COL1A2P08123 1366 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 A0A1W2PQ09 198 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 RRN3P2A6NIE6 340 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 A8MUA0 341 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 TNFRSF21O75509 655 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 WBP4O75554 376 aaKnown RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 UROSP10746 265 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CCR1P32246 355 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CPT1AP50416 773 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CXCR4P61073 352 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SOX4Q06945 474 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SEMA3BQ13214 749 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 EFR3AQ14156 821 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 KIAA0319Q5VV43 1072 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC46A3Q7Z3Q1 461 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 UNC93AQ86WB7 457 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 OSTM1Q86WC4 334 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CCDC71Q8IV32 467 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SDR16C5Q8N3Y7 309 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 AADATQ8N5Z0 425 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 YIPF7Q8N8F6 280 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 OR52B6Q8NGF0 335 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CLHC1Q8NHS4 586 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 FAM120BQ96EK7 910 aaKnown RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 ATOH8Q96SQ7 321 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 COLEC11Q9BWP8 271 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 GON7Q9BXV9 100 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 TMPRSS11EQ9UL52 423 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 TTC3P53804 2025 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 VCANP13611 3396 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 EFCAB10A6NFE3 127 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 A8MX80 341 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 ECI2O75521 394 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 WDR47O94967 919 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 MLYCDO95822 493 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 NPPAP01160 153 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 STSP08842 583 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 PIRTP0C851 137 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 PRR35P0CG20 571 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 PRSS56P0CW18 603 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CYP2A6P11509 494 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 M6PRP20645 277 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 IDH2P48735 452 aaKnown RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CACNB2Q08289 660 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 FAPQ12884 760 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 TOR2AQ5JU69 321 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZNF648Q5T619 568 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZNF549Q6P9A3 640 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CCDC190Q86UF4 302 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 CAMKK1Q8N5S9 505 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 METTL6Q8TCB7 284 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 GPR151Q8TDV0 419 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC13A3Q8WWT9 602 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 TTPALQ9BTX7 342 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 NFKBIZQ9BYH8 718 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 DCAF13Q9NV06 445 aaKnown RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 GPR83Q9NYM4 423 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 EIF2B4Q9UI10 523 aaKnown RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 SAMHD1Q9Y3Z3 626 aaKnown RBP14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 COMMD10Q9Y6G5 202 aa14.35□□□□□ -0.11
NCKIPSD-204ENST00000416649 MYLKQ15746 1914 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 NPEPPSL1A6NEC2 478 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 TSPAN3O60637 253 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms