RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 FERMT1Q9BQL6 677 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 SCNM1Q9BWG6 230 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 AP1M1Q9BXS5 423 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 TEX101Q9BY14 249 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 FRMD8Q9BZ67 464 aaPredicted RBP4.81□□□□□ -1.64
VPS41-205ENST00000414632 CARD9Q9H257 536 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 FAM83DQ9H4H8 585 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 FAM96AQ9H5X1 160 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 LDAHQ9H6V9 325 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 ZNF552Q9H707 407 aaPredicted RBP4.81□□□□□ -1.64
VPS41-205ENST00000414632 BCO1Q9HAY6 547 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 CASS4Q9NQ75 786 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 PCMTD2Q9NV79 361 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 SPASTQ9UBP0 616 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 ZNHIT2Q9UHR6 403 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 CDC23Q9UJX2 597 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 SUFUQ9UMX1 484 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 RPL26L1Q9UNX3 145 aaKnown RBP4.81□□□□□ -1.64
VPS41-205ENST00000414632 ARL5AQ9Y689 179 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS41-205ENST00000414632 NBEAQ8NFP9 2946 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 ZFHX4Q86UP3 3567 aa4.81□□□□□ -1.64
VPS41-205ENST00000414632 ZZEF1O43149 2961 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 FREM2Q5SZK8 3169 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ITPR1Q14643 2758 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 IGF2RP11717 2491 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 LY6G6EA0A0G2JKS1 128 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 C5orf60A6NFR6 353 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 NEMP2A6NFY4 417 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ISM1B1AKI9 464 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 E7EVH7 732 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 LMO7DNF2Z398 122 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 STX7O15400 261 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 KIF5CO60282 957 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A9O60656 530 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ANXA9O76027 345 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 AMY1AP04745 511 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 FGF1P05230 155 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 PRSS56P0CW18 603 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ZNF8P17098 575 aaPredicted RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 CKMT2P17540 419 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A6P19224 532 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 HLA-DPA1P20036 260 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A1P22309 533 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A4P22310 534 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 KELP23276 732 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ADRA1AP35348 466 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A3P35503 534 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A5P35504 534 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 TRIM23P36406 574 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 SPAM1P38567 509 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ACTR1BP42025 376 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 GRIA1P42261 906 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 BLKP51451 505 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ACTR1AP61163 376 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 GNG11P61952 73 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 TLE1Q04724 770 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 DPTQ07507 201 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 CCDC173Q0VFZ6 552 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 POU6F1Q14863 301 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ELOCQ15369 112 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 SMAD1Q15797 465 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 CHRNA6Q15825 494 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 PDCD2Q16342 344 aaPredicted RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 ATP13A5Q4VNC0 1218 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 CCDC38Q502W7 563 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 HENMT1Q5T8I9 393 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 HES3Q5TGS1 186 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 TTC27Q6P3X3 843 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 GSTA5Q7RTV2 222 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 EFL1Q7Z2Z2 1120 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 GLRX5Q86SX6 157 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ZNF605Q86T29 641 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 GKN2Q86XP6 184 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 NRROSQ86YC3 692 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 SLC35F3Q8IY50 421 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 NRSN1Q8IZ57 195 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UNC5BQ8IZJ1 945 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 PRELID2Q8N945 189 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 CCDC89Q8N998 374 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 FAM46DQ8NEK8 389 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 OR4K2Q8NGD2 314 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 OR52K1Q8NGK4 314 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 OR13C4Q8NGS5 318 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 GDAP1Q8TB36 358 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 COX14Q96I36 57 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 HIC2Q96JB3 615 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 OSBPL9Q96SU4 736 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UNKQ9C0B0 810 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 OR2AG1Q9H205 316 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 DPEP2Q9H4A9 486 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A7Q9HAW7 530 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A10Q9HAW8 530 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 UGT1A8Q9HAW9 530 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 MAGEE1Q9HCI5 957 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 SPATS2LQ9NUQ6 558 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 SIRT5Q9NXA8 310 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 NLGN3Q9NZ94 848 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 ATXN10Q9UBB4 475 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms