RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 CSNK1G3Q9Y6M4 447 aa1.62□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZNF541Q9H0D2 1346 aa1.62□□□□□ -2.15
RNU2-54P-201ENST00000410299 ARID2Q68CP9 1835 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 OR2A25A4D2G3 310 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ASB14A6NK59 587 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 C2orf81A6NN90 581 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 B4DLN1 442 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 CTDSP2O14595 271 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 AP3D1O14617 1153 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 VILLO15195 856 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 BCL2L11O43521 198 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 TSPAN1O60635 241 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 TRUB2O95900 331 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 IGKV3-15P01624 115 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 VTNP04004 478 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 SLC2A2P11168 524 aaPredicted RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 CDC25CP30307 473 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 SLC15A1P46059 708 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 SLC9A3P48764 834 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ARSEP51690 589 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 MRPL12P52815 198 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 PNLIPRP2P54317 469 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 XGP55808 180 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ARF3P61204 181 aaPredicted RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 DCAF7P61962 342 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ARF1P84077 181 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 GUCY2DQ02846 1103 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 CD300CQ08708 224 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 AIMP2Q13155 320 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 CA9Q16790 459 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ODF4Q2M2E3 257 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 PDLIM3Q53GG5 364 aaPredicted RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 IGSF11Q5DX21 431 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 RAB41Q5JT25 222 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 LCN1P1Q5VSP4 162 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 CES4AQ5XG92 561 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 UGT3A1Q6NUS8 523 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 TMPRSS11BQ86T26 416 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ADIPOR2Q86V24 386 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 SLC47A2Q86VL8 602 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 TMEM173Q86WV6 379 aaPredicted RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 C1orf131Q8NDD1 294 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZPLD1Q8TCW7 415 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 GATAD1Q8WUU5 269 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 APOBEC4Q8WW27 367 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 SSMEM1Q8WWF3 244 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 DHX58Q96C10 678 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 PDLIM5Q96HC4 596 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 GAL3ST4Q96RP7 486 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 PAFAH2Q99487 392 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 NKX3-1Q99801 234 aaPredicted RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZNF577Q9BSK1 485 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 RPP25Q9BUL9 199 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 PUS3Q9BZE2 481 aaKnown RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 MIS12Q9H081 205 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 MED20Q9H944 212 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 GNB4Q9HAV0 340 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 Q9N2K0 584 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 GKN1Q9NS71 199 aa1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 WSB2Q9NYS7 404 aaPredicted RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 SUCLA2Q9P2R7 463 aaPredicted RBP1.61□□□□□ -2.15
RNU2-54P-201ENST00000410299 FER1L5A0AVI2 2057 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 A0A1W2PQ09 198 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 TMEM221A6NGB7 291 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ACOD1A6NK06 481 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 SNURFLB1AK76 121 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 F5H0A9 414 aaPredicted RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 MEIS2O14770 477 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ADAMDEC1O15204 470 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 EPB41L2O43491 1005 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 BCL10O95999 233 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 HPRP00739 348 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 GJA1P17302 382 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 TRIM21P19474 475 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 DNASE1P24855 282 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 CSTF2P33240 577 aaKnown RBP eCLIP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 TSFMP43897 325 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 KRTAP10-8P60410 259 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 MAT1AQ00266 395 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZFP36L1Q07352 338 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 EFTUD2Q15029 972 aaKnown RBP eCLIP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZNF74Q16587 644 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 MTHFSDQ2M296 383 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 UGT3A2Q3SY77 523 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 SYT14P1Q58G82 188 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 GORABQ5T7V8 394 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 RNASEH2BQ5TBB1 312 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 FAAH2Q6GMR7 532 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 DHRS7BQ6IAN0 325 aaPredicted RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 CCDC70Q6NSX1 233 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 FAM180BQ6P0A1 224 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 FRRS1Q6ZNA5 592 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 G2E3Q7L622 706 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ARHGAP22Q7Z5H3 698 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 KBTBD6Q86V97 674 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 NUDT13Q86X67 352 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 LRRC15Q8TF66 581 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 CHPT1Q8WUD6 406 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 PIGBQ92521 554 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 HDAC2Q92769 488 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms