RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 DCLK2Q8N568 766 aa3.56□□□□□ -1.84
PMS1-203ENST00000409593 SMAP2Q8WU79 429 aaPredicted RBP3.56□□□□□ -1.84
PMS1-203ENST00000409593 CCDC106Q9BWC9 280 aa3.56□□□□□ -1.84
PMS1-203ENST00000409593 APOL6Q9BWW8 343 aa3.56□□□□□ -1.84
PMS1-203ENST00000409593 SLC24A2Q9UI40 661 aa3.56□□□□□ -1.84
PMS1-203ENST00000409593 FBXO2Q9UK22 296 aaPredicted RBP3.56□□□□□ -1.84
PMS1-203ENST00000409593 hCG_1809904A0A1W2PP81 198 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 A0A1W2PPE2 198 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 A0A1W2PR64 198 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MSGN1A6NI15 193 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MAGEC1O60732 1142 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 DDHD2O94830 711 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 STARD3NLO95772 234 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MMP12P39900 470 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MTHFRP42898 656 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MAPK12P53778 367 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 PAX9P55771 341 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 HNRNPKP61978 463 aaKnown RBP eCLIP3.55□□□□□ -1.84
PMS1-203ENST00000409593 GCNT1Q02742 428 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 HERC3Q15034 1050 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 HLA-BQ31612 363 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MFSD12Q6NUT3 480 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 TRIM65Q6PJ69 517 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 TMEM207Q6UWW9 146 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 NUDT13Q86X67 352 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 SYT2Q8N9I0 419 aaPredicted RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 TEKT4Q8WW24 435 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 AZIN2Q96A70 460 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 DGAT2Q96PD7 388 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 FGFBP2Q9BYJ0 223 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 UBA5Q9GZZ9 404 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 SHARPINQ9H0F6 387 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 GDE1Q9NZC3 331 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 OR6C2Q9NZP2 312 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 DDX25Q9UHL0 483 aaKnown RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 ABT1Q9ULW3 272 aaKnown RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 PPP1R3CQ9UQK1 317 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 PPP2R2CQ9Y2T4 447 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 C2orf81A6NN90 581 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 EPHB6O15197 1021 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 ADAM20O43506 726 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 TRUB2O95900 331 aaKnown RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 DANCRP0C864 163 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 TRIM49P0CI25 452 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 TRIM49CP0CI26 452 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 SP100P23497 879 aaPredicted RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 MPZP25189 248 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 GSDMDP57764 484 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MAT1AQ00266 395 aaKnown RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 DRP2Q13474 957 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 LCN1P1Q5VSP4 162 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 ZNF613Q6PF04 617 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 BTN2A1Q7KYR7 527 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 NUP54Q7Z3B4 507 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 MMD2Q8IY49 270 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 THAP8Q8NA92 274 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 TSPAN14Q8NG11 270 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 FAM20AQ96MK3 541 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 ZNF830Q96NB3 372 aaPredicted RBP3.55□□□□□ -1.84
PMS1-203ENST00000409593 SPHK2Q9NRA0 654 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 HAO2Q9NYQ3 351 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 ERAP1Q9NZ08 941 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 ASIC3Q9UHC3 531 aa3.55□□□□□ -1.84
PMS1-203ENST00000409593 LINGO3P0C6S8 592 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 CSTF2P33240 577 aaKnown RBP eCLIP3.54□□□□□ -1.84
PMS1-203ENST00000409593 OPRL1P41146 370 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 IL11RAQ14626 422 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 WLSQ5T9L3 541 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 ADGRA1Q86SQ6 560 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 BMPERQ8N8U9 685 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 AVL9Q8NBF6 648 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 OR10G8Q8NGN5 311 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 USP28Q96RU2 1077 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 RBM4BQ9BQ04 359 aaKnown RBP3.54□□□□□ -1.84
PMS1-203ENST00000409593 PANK2Q9BZ23 570 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 MYNNQ9NPC7 610 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 PRMT7Q9NVM4 692 aaPredicted RBP3.54□□□□□ -1.84
PMS1-203ENST00000409593 TRIM17Q9Y577 477 aa3.54□□□□□ -1.84
PMS1-203ENST00000409593 NEMP2A6NFY4 417 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 GLRA3O75311 464 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 LHCGRP22888 699 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 CCR10P46092 362 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 LETM2Q2VYF4 491 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 UGT3A2Q3SY77 523 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 KRT71Q3SY84 523 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 FASTKD1Q53R41 847 aaKnown RBP3.53□□□□□ -1.84
PMS1-203ENST00000409593 SLC35D3Q5M8T2 416 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 METTL7BQ6UX53 244 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 CAMKMTQ7Z624 323 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 LRRTM1Q86UE6 522 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 ZNF519Q8TB69 540 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 PIGBQ92521 554 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 SECISBP2LQ93073 1101 aaKnown RBP3.53□□□□□ -1.84
PMS1-203ENST00000409593 ZNF486Q96H40 463 aaPredicted RBP3.53□□□□□ -1.84
PMS1-203ENST00000409593 NECTIN4Q96NY8 510 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 NUDT16L1Q9BRJ7 211 aaKnown RBP3.53□□□□□ -1.84
PMS1-203ENST00000409593 UPF3AQ9H1J1 476 aaKnown RBP3.53□□□□□ -1.84
PMS1-203ENST00000409593 ANKZF1Q9H8Y5 726 aa3.53□□□□□ -1.84
PMS1-203ENST00000409593 C19orf25Q9UFG5 118 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms