RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 STK25O00506 426 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ANKRD28O15084 1053 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 MID1O15344 667 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 PEX1O43933 1283 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 SLC16A8O95907 504 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 PDYNP01213 254 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 IL6P05231 212 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ZNF8P17098 575 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 TCN1P20061 433 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ATP6V1C1P21283 382 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ITPKAP23677 461 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 SLC6A2P23975 617 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 VARSP26640 1264 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 IL12AP29459 219 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 MSX2P35548 267 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 TRIM23P36406 574 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 WASP42768 502 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ZFP36L2P47974 494 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 PREPP48147 710 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ERFP50548 548 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 SLC7A2P52569 658 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 PNLIPRP1P54315 467 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 RPL38P63173 70 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 RPS21P63220 83 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 HMGCS1Q01581 520 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 RHDQ02161 417 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 SGCGQ13326 291 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 KIAA0040Q15053 153 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 XKR6Q5GH73 641 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 C10orf62Q5T681 223 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 AGBL4Q5VU57 503 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 FAM219BQ5XKK7 198 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 CAPN13Q6MZZ7 669 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 UNC5DQ6UXZ4 953 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 TRMT11Q7Z4G4 463 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 AMZ2Q86W34 360 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 SPATA24Q86W54 205 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 DHFR2Q86XF0 187 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 HID1Q8IV36 788 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 TDHQ8IZJ6 230 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 AADATQ8N5Z0 425 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 GOLM1Q8NBJ4 401 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 BHLHE22Q8NFJ8 381 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 OR9A1PQ8NGU1 263 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 DNAJB8Q8NHS0 232 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 SETD7Q8WTS6 366 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 VPS33AQ96AX1 596 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 MTFMTQ96DP5 389 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 CMTM7Q96FZ5 175 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 DUS3LQ96G46 650 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 LRGUKQ96M69 825 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 HBEGFQ99075 208 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 EFHD1Q9BUP0 239 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 C1QTNF7Q9BXJ2 289 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 DPY30Q9C005 99 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 TRIM15Q9C019 465 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 KLHL4Q9C0H6 718 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 MUC13Q9H3R2 512 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ZNF576Q9H609 170 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 IL1RL2Q9HB29 575 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 ITM2CQ9NQX7 267 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 FARSBQ9NSD9 589 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 NMRK1Q9NWW6 199 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 CLDND1Q9NY35 253 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 STOX2Q9P2F5 926 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 GULP1Q9UBP9 304 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 SCML1Q9UN30 329 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 AP3M1Q9Y2T2 418 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 PCDHGA11Q9Y5H2 935 aa6.09□□□□□ -1.43
GTF3C3-202ENST00000409364 TNRC18O15417 2968 aaPredicted RBP6.09□□□□□ -1.44
GTF3C3-202ENST00000409364 KANSL1LA0AUZ9 987 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 AQP12BA6NM10 295 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 H3BNX3 289 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 CASQ2O14958 399 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 KMOO15229 486 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 PI15O43692 258 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 DNAJA2O60884 412 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 KCNJ13O60928 360 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 RNASEH2AO75792 299 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 RPN2P04844 631 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 RPSAP08865 295 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 BCKDHAP12694 445 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 HSD3B1P14060 373 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 DRD1P21728 446 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 HSD3B2P26439 372 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 ACADLP28330 430 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 IMPA1P29218 277 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 PBLDP30039 288 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 HSD17B2P37059 387 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 NEK2P51955 445 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 CLNS1AP54105 237 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 CLDN8P56748 225 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 EEFSECP57772 596 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 TAS2R38P59533 333 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 RPS14P62263 151 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 MRPS22P82650 360 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 CDK3Q00526 305 aa6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 DLX2Q07687 328 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-202ENST00000409364 CSTF3Q12996 717 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms